Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC017002.4-201ENST00000604721 1525 ntBASIC3.54□□□□□ -1.84
VSX2P58304 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
VSX2P58304 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX2P58304 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
VSX2P58304 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VSX2P58304 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 RNU6-185P-201ENST00000384421 107 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC007066.1-201ENST00000392902 381 ntBASIC3.54□□□□□ -1.84
VSX2P58304 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VSX2P58304 RNA5SP498-201ENST00000411342 120 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AL451062.2-201ENST00000427515 271 ntBASIC3.54□□□□□ -1.84
VSX2P58304 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX2P58304 ATP5HP2-201ENST00000433885 485 ntBASIC3.54□□□□□ -1.84
VSX2P58304 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX2P58304 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX2P58304 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VSX2P58304 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VSX2P58304 RPL7P15-201ENST00000461190 712 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC034236.1-201ENST00000469891 373 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC004069.2-201ENST00000505438 1114 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX2P58304 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 RNU1-95P-201ENST00000516357 160 ntBASIC3.54□□□□□ -1.84
VSX2P58304 RNU1-128P-201ENST00000516704 160 ntBASIC3.54□□□□□ -1.84
VSX2P58304 HAUS1P3-201ENST00000523909 662 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX2P58304 OR7E13P-201ENST00000526052 910 ntBASIC3.54□□□□□ -1.84
VSX2P58304 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX2P58304 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX2P58304 GTF2IP22-201ENST00000554443 182 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
VSX2P58304 AC053481.3-201ENST00000577881 843 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AL390816.3-201ENST00000604527 1066 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AL163642.2-201ENST00000604722 1019 ntBASIC3.54□□□□□ -1.84
VSX2P58304 BRDTP1-201ENST00000605735 677 ntBASIC3.54□□□□□ -1.84
VSX2P58304 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.54□□□□□ -1.84
VSX2P58304 AC004943.3-201ENST00000624116 600 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC091905.1-201ENST00000624400 311 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC116563.2-201ENST00000624751 535 ntBASIC3.54□□□□□ -1.84
VSX2P58304 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VSX2P58304 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VSX2P58304 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX2P58304 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX2P58304 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VSX2P58304 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VSX2P58304 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
VSX2P58304 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VSX2P58304 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VSX2P58304 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VSX2P58304 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VSX2P58304 SNORA5A-201ENST00000384111 134 ntBASIC3.53□□□□□ -1.84
VSX2P58304 HMGN2P8-201ENST00000391458 268 ntBASIC3.53□□□□□ -1.84
VSX2P58304 RANP4-201ENST00000413361 655 ntBASIC3.53□□□□□ -1.84
VSX2P58304 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.53□□□□□ -1.84
VSX2P58304 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.53□□□□□ -1.84
VSX2P58304 AL160175.1-201ENST00000428124 247 ntBASIC3.53□□□□□ -1.84
VSX2P58304 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.53□□□□□ -1.84
VSX2P58304 CBX1P4-201ENST00000439415 457 ntBASIC3.53□□□□□ -1.84
VSX2P58304 XKRY2-201ENST00000442362 1093 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AL358232.1-201ENST00000448030 501 ntBASIC3.53□□□□□ -1.84
VSX2P58304 HMGN2P7-201ENST00000456186 273 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AC022034.3-201ENST00000471393 478 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AC021146.1-201ENST00000511202 716 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.53□□□□□ -1.84
VSX2P58304 AL121766.1-201ENST00000547436 487 ntBASIC3.53□□□□□ -1.84
VSX2P58304 NOP56P3-201ENST00000549457 385 ntBASIC3.53□□□□□ -1.84
VSX2P58304 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.53□□□□□ -1.84
VSX2P58304 EIF1P6-201ENST00000600054 334 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AC242628.1-201ENST00000606810 391 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
VSX2P58304 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.53□□□□□ -1.84
VSX2P58304 U7.8-201ENST00000619968 63 ntBASIC3.53□□□□□ -1.84
VSX2P58304 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.53□□□□□ -1.84
VSX2P58304 AL034408.1-202ENST00000636088 415 ntBASIC3.53□□□□□ -1.84
VSX2P58304 AC119674.1-207ENST00000641355 633 ntBASIC3.53□□□□□ -1.84
VSX2P58304 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VSX2P58304 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VSX2P58304 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VSX2P58304 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.52□□□□□ -1.85
VSX2P58304 LINC00561-201ENST00000565815 2738 ntBASIC3.52□□□□□ -1.85
VSX2P58304 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VSX2P58304 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VSX2P58304 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
VSX2P58304 RNA5SP51-201ENST00000364750 119 ntBASIC3.52□□□□□ -1.85
VSX2P58304 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.52□□□□□ -1.85
VSX2P58304 AL589655.1-201ENST00000405398 482 ntBASIC3.52□□□□□ -1.85
VSX2P58304 LINC01881-201ENST00000416103 412 ntBASIC3.52□□□□□ -1.85
VSX2P58304 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VSX2P58304 AC009965.2-201ENST00000425328 970 ntBASIC3.52□□□□□ -1.85
VSX2P58304 AL590623.1-201ENST00000427864 105 ntBASIC3.52□□□□□ -1.85
VSX2P58304 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VSX2P58304 AL353093.1-201ENST00000441292 436 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms