Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PKNOX1P55347 AL049737.1-201ENST00000413920 1403 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 RNU6-543P-201ENST00000362576 108 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PKNOX1P55347 RNA5SP424-201ENST00000390988 115 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 PTP4A1P3-201ENST00000433661 420 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AL590762.3-201ENST00000436372 640 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 ELOCP3-201ENST00000439303 348 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC092685.1-201ENST00000447960 1243 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AL035404.1-201ENST00000497982 568 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 MTATP6P22-201ENST00000507369 598 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC010468.3-201ENST00000508225 458 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC087272.1-201ENST00000523624 533 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC090751.1-201ENST00000566966 267 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC005255.1-201ENST00000593748 216 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC015726.1-201ENST00000602353 681 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AL671309.1-201ENST00000603750 544 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AL163642.2-201ENST00000604722 1019 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC099669.2-201ENST00000616549 437 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AC004943.3-201ENST00000624116 600 ntBASIC3.65□□□□□ -1.83
PKNOX1P55347 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.65□□□□□ -1.83
PKNOX1P55347 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PKNOX1P55347 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
PKNOX1P55347 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PKNOX1P55347 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PKNOX1P55347 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
PKNOX1P55347 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 SNORA62-201ENST00000365493 153 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.64□□□□□ -1.83
PKNOX1P55347 TCEA1P2-201ENST00000420496 906 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AC099563.1-201ENST00000456086 418 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 HMGN2P7-201ENST00000456186 273 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AC004801.2-202ENST00000463559 283 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AC007537.2-201ENST00000472093 511 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 RPL7P47-201ENST00000497299 556 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AC025768.1-201ENST00000510057 267 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AL121766.1-201ENST00000547436 487 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.64□□□□□ -1.83
PKNOX1P55347 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.64□□□□□ -1.83
PKNOX1P55347 OR2BH1P-201ENST00000608850 864 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 CDRT1-208ENST00000630868 794 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 AC091948.2-201ENST00000636510 279 ntBASIC3.64□□□□□ -1.83
PKNOX1P55347 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.64□□□□□ -1.83
PKNOX1P55347 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PKNOX1P55347 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.64□□□□□ -1.83
PKNOX1P55347 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKNOX1P55347 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKNOX1P55347 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PKNOX1P55347 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PKNOX1P55347 AL121657.1-201ENST00000327215 531 ntBASIC3.63□□□□□ -1.83
PKNOX1P55347 RNU6-792P-201ENST00000363490 107 ntBASIC3.63□□□□□ -1.83
PKNOX1P55347 RNU6-213P-201ENST00000384051 104 ntBASIC3.63□□□□□ -1.83
PKNOX1P55347 MIR184-201ENST00000384962 84 ntBASIC3.63□□□□□ -1.83
PKNOX1P55347 RNU6-328P-201ENST00000390887 106 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms