Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA2P51587 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.41□□□□□ -1.86
BRCA2P51587 AL356274.1-201ENST00000617064 410 ntBASIC3.41□□□□□ -1.86
BRCA2P51587 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA2P51587 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA2P51587 AC004552.1-201ENST00000419089 348 ntBASIC3.41□□□□□ -1.86
BRCA2P51587 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCA2P51587 HMGB3P14-201ENST00000494195 599 ntBASIC3.41□□□□□ -1.86
BRCA2P51587 AC027176.1-201ENST00000560204 514 ntBASIC3.41□□□□□ -1.86
BRCA2P51587 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA2P51587 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA2P51587 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
BRCA2P51587 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
BRCA2P51587 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
BRCA2P51587 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
BRCA2P51587 AC117434.1-201ENST00000419971 836 ntBASIC3.4□□□□□ -1.86
BRCA2P51587 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.4□□□□□ -1.86
BRCA2P51587 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.4□□□□□ -1.86
BRCA2P51587 AC008837.1-201ENST00000511513 412 ntBASIC3.4□□□□□ -1.86
BRCA2P51587 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.4□□□□□ -1.86
BRCA2P51587 AL049874.4-201ENST00000557593 255 ntBASIC3.4□□□□□ -1.86
BRCA2P51587 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.4□□□□□ -1.86
BRCA2P51587 AC096947.1-201ENST00000603233 470 ntBASIC3.4□□□□□ -1.86
BRCA2P51587 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
BRCA2P51587 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.86
BRCA2P51587 AC017002.4-201ENST00000604721 1525 ntBASIC3.4□□□□□ -1.86
BRCA2P51587 AC018529.3-201ENST00000624212 2254 ntBASIC3.4□□□□□ -1.87
BRCA2P51587 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.4□□□□□ -1.87
BRCA2P51587 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCA2P51587 GDA-209ENST00000545168 5362 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCA2P51587 SNORA71.1-201ENST00000364523 117 ntBASIC3.4□□□□□ -1.87
BRCA2P51587 RN7SKP56-201ENST00000410513 331 ntBASIC3.4□□□□□ -1.87
BRCA2P51587 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCA2P51587 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCA2P51587 MIR3936-201ENST00000584304 110 ntBASIC3.4□□□□□ -1.87
BRCA2P51587 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRCA2P51587 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.4□□□□□ -1.87
BRCA2P51587 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCA2P51587 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCA2P51587 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCA2P51587 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
BRCA2P51587 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
BRCA2P51587 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
BRCA2P51587 AL450338.1-201ENST00000407987 512 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA2P51587 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA2P51587 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.39□□□□□ -1.87
BRCA2P51587 AC092184.1-201ENST00000625042 715 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
BRCA2P51587 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 MIR1287-201ENST00000408492 90 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 RPS12P18-201ENST00000442381 270 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA2P51587 YWHAQP9-201ENST00000445891 512 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AC078785.3-201ENST00000476607 425 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AC114781.4-201ENST00000513707 639 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA2P51587 SNORD53-201ENST00000579969 78 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AL158827.2-201ENST00000602494 330 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 AL691447.3-201ENST00000635020 330 ntBASIC3.39□□□□□ -1.87
BRCA2P51587 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA2P51587 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
BRCA2P51587 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
BRCA2P51587 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC3.39□□□□□ -1.87
BRCA2P51587 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.39□□□□□ -1.87
BRCA2P51587 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.38□□□□□ -1.87
BRCA2P51587 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.38□□□□□ -1.87
BRCA2P51587 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 AC022509.4-201ENST00000621404 572 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
BRCA2P51587 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 RNU1-108P-201ENST00000362556 161 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 AC021205.2-201ENST00000480069 347 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 COX6CP8-201ENST00000522620 226 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 AC009852.2-201ENST00000567898 485 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 HLFP1-201ENST00000402375 499 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 AC126124.2-201ENST00000413542 321 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 AC012065.2-201ENST00000421295 375 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms