Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.92□□□□□ -1.46
LIG3P49916 HMGB3P12-201ENST00000438745 556 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.92□□□□□ -1.46
LIG3P49916 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.92□□□□□ -1.46
LIG3P49916 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 AC016724.1-201ENST00000453215 421 ntBASIC5.92□□□□□ -1.46
LIG3P49916 PMCHL2-203ENST00000457791 237 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIG3P49916 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 SNORD46.2-201ENST00000516021 102 ntBASIC5.92□□□□□ -1.46
LIG3P49916 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.92□□□□□ -1.46
LIG3P49916 snoU109.6-201ENST00000516831 118 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIG3P49916 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 SUB1P2-201ENST00000556401 297 ntBASIC5.92□□□□□ -1.46
LIG3P49916 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 AC008521.2-201ENST00000591021 259 ntBASIC5.92□□□□□ -1.46
LIG3P49916 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.92□□□□□ -1.46
LIG3P49916 FAM27E4-201ENST00000605259 342 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AC055876.5-201ENST00000605667 259 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AC093788.1-201ENST00000609356 927 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AL136295.6-201ENST00000610486 658 ntBASIC5.92□□□□□ -1.46
LIG3P49916 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.92□□□□□ -1.46
LIG3P49916 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.92□□□□□ -1.46
LIG3P49916 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.92□□□□□ -1.46
LIG3P49916 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG3P49916 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG3P49916 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG3P49916 THAP12P9-201ENST00000503971 2360 ntBASIC5.92□□□□□ -1.46
LIG3P49916 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIG3P49916 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG3P49916 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LIG3P49916 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LIG3P49916 RNU6-1322P-201ENST00000364309 107 ntBASIC5.91□□□□□ -1.46
LIG3P49916 Y_RNA.263-201ENST00000364659 114 ntBASIC5.91□□□□□ -1.46
LIG3P49916 RNU6-282P-201ENST00000365357 103 ntBASIC5.91□□□□□ -1.46
LIG3P49916 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG3P49916 RNU6-730P-201ENST00000383954 104 ntBASIC5.91□□□□□ -1.46
LIG3P49916 RPL23AP32-201ENST00000395315 459 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG3P49916 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG3P49916 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.91□□□□□ -1.46
LIG3P49916 USP9YP9-201ENST00000429406 715 ntBASIC5.91□□□□□ -1.46
LIG3P49916 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG3P49916 AC126120.1-201ENST00000431082 470 ntBASIC5.91□□□□□ -1.46
LIG3P49916 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG3P49916 AC104850.1-201ENST00000435940 476 ntBASIC5.91□□□□□ -1.46
LIG3P49916 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG3P49916 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG3P49916 AC093019.1-201ENST00000443135 252 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AL136380.1-201ENST00000447970 162 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG3P49916 RPL7P15-201ENST00000461190 712 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AC007998.1-201ENST00000474156 672 ntBASIC5.91□□□□□ -1.46
LIG3P49916 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG3P49916 COX6B1P2-201ENST00000489624 230 ntBASIC5.91□□□□□ -1.46
LIG3P49916 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 CENPUP1-201ENST00000526649 1202 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.91□□□□□ -1.46
LIG3P49916 AC123904.3-201ENST00000547218 814 ntBASIC5.91□□□□□ -1.46
LIG3P49916 SULT1C2P2-201ENST00000562517 294 ntBASIC5.91□□□□□ -1.46
LIG3P49916 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG3P49916 AC099489.2-201ENST00000574976 260 ntBASIC5.91□□□□□ -1.46
LIG3P49916 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIG3P49916 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LIG3P49916 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LIG3P49916 AC005261.5-201ENST00000596280 355 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AC006115.2-201ENST00000596823 202 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AC068790.5-201ENST00000602741 355 ntBASIC5.91□□□□□ -1.46
LIG3P49916 AC007621.1-201ENST00000604544 437 ntBASIC5.91□□□□□ -1.46
LIG3P49916 OR10AB1P-201ENST00000609613 938 ntBASIC5.91□□□□□ -1.46
LIG3P49916 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 FER-210ENST00000628534 558 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LIG3P49916 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LIG3P49916 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
LIG3P49916 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG3P49916 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG3P49916 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG3P49916 MTND5P17-201ENST00000418405 1603 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms