Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC073387.2-201ENST00000604797 784 ntBASIC4.25□□□□□ -1.73
LHX1P48742 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 RNU6-213P-201ENST00000384051 104 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 RPL7P2-201ENST00000427639 268 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 AC244505.3-201ENST00000454598 187 ntBASIC4.24□□□□□ -1.73
LHX1P48742 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 FTH1P24-201ENST00000503502 462 ntBASIC4.24□□□□□ -1.73
LHX1P48742 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 AC008885.2-201ENST00000509506 930 ntBASIC4.24□□□□□ -1.73
LHX1P48742 TPT1P8-201ENST00000510120 555 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 RNA5SP179-201ENST00000517284 121 ntBASIC4.24□□□□□ -1.73
LHX1P48742 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 AC021451.1-201ENST00000523498 1129 ntBASIC4.24□□□□□ -1.73
LHX1P48742 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 NDUFS5P6-201ENST00000529136 295 ntBASIC4.24□□□□□ -1.73
LHX1P48742 OR8I1P-201ENST00000529291 931 ntBASIC4.24□□□□□ -1.73
LHX1P48742 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 PDCD5P1-201ENST00000543528 309 ntBASIC4.24□□□□□ -1.73
LHX1P48742 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.24□□□□□ -1.73
LHX1P48742 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 AC106785.1-201ENST00000565935 262 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.24□□□□□ -1.73
LHX1P48742 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.24□□□□□ -1.73
LHX1P48742 AC090330.1-201ENST00000588646 764 ntBASIC4.24□□□□□ -1.73
LHX1P48742 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.24□□□□□ -1.73
LHX1P48742 AC091488.1-201ENST00000604239 660 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AC105148.1-201ENST00000604961 409 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AC091167.4-201ENST00000605079 184 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.24□□□□□ -1.73
LHX1P48742 AP000240.1-201ENST00000609910 452 ntBASIC4.24□□□□□ -1.73
LHX1P48742 AC243756.2-201ENST00000618406 463 ntBASIC4.24□□□□□ -1.73
LHX1P48742 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LHX1P48742 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.24□□□□□ -1.73
LHX1P48742 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LHX1P48742 AC016588.2-201ENST00000632484 3021 ntBASIC4.24□□□□□ -1.73
LHX1P48742 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.23□□□□□ -1.73
LHX1P48742 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LHX1P48742 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LHX1P48742 RNA5SP399-201ENST00000364003 117 ntBASIC4.23□□□□□ -1.73
LHX1P48742 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LHX1P48742 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LHX1P48742 LAP3P1-201ENST00000403648 294 ntBASIC4.23□□□□□ -1.73
LHX1P48742 HNRNPDP2-201ENST00000406475 478 ntBASIC4.23□□□□□ -1.73
LHX1P48742 RPL7AP73-201ENST00000413490 353 ntBASIC4.23□□□□□ -1.73
LHX1P48742 PRELID3BP11-201ENST00000414230 479 ntBASIC4.23□□□□□ -1.73
LHX1P48742 BTF3P8-201ENST00000414577 526 ntBASIC4.23□□□□□ -1.73
LHX1P48742 EIF4EP1-201ENST00000422311 642 ntBASIC4.23□□□□□ -1.73
LHX1P48742 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LHX1P48742 AC092634.2-201ENST00000428146 1010 ntBASIC4.23□□□□□ -1.73
LHX1P48742 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.23□□□□□ -1.73
LHX1P48742 RPL37P1-201ENST00000432310 284 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC004865.1-201ENST00000442276 1003 ntBASIC4.23□□□□□ -1.73
LHX1P48742 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.23□□□□□ -1.73
LHX1P48742 AC233982.1-201ENST00000451247 436 ntBASIC4.23□□□□□ -1.73
LHX1P48742 RPL6P9-201ENST00000466502 859 ntBASIC4.23□□□□□ -1.73
LHX1P48742 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.23□□□□□ -1.73
LHX1P48742 RPS4XP15-201ENST00000489210 795 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.23□□□□□ -1.73
LHX1P48742 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.23□□□□□ -1.73
LHX1P48742 YPEL5P3-201ENST00000547227 352 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC068446.3-201ENST00000555285 382 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC084757.1-201ENST00000559987 490 ntBASIC4.23□□□□□ -1.73
LHX1P48742 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 RN7SL703P-201ENST00000578485 302 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.23□□□□□ -1.73
LHX1P48742 MIR4512-201ENST00000583257 77 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms