Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC104850.1-201ENST00000435940 476 ntBASIC5.66□□□□□ -1.5
CCNFP41002 HMGB3P12-201ENST00000438745 556 ntBASIC5.66□□□□□ -1.5
CCNFP41002 HMGN1P2-201ENST00000445197 310 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 AC144530.1-201ENST00000452862 555 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC087312.1-201ENST00000471411 480 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 AP001025.2-201ENST00000490908 477 ntBASIC5.66□□□□□ -1.5
CCNFP41002 HMGN1P12-201ENST00000499125 195 ntBASIC5.66□□□□□ -1.5
CCNFP41002 MTCYBP18-201ENST00000501056 747 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.66□□□□□ -1.5
CCNFP41002 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.66□□□□□ -1.5
CCNFP41002 MTCO1P35-201ENST00000515270 228 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RNU6-445P-201ENST00000516949 107 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC139365.2-201ENST00000517972 253 ntBASIC5.66□□□□□ -1.5
CCNFP41002 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.66□□□□□ -1.5
CCNFP41002 COX6CP8-201ENST00000522620 226 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AF235103.2-201ENST00000525753 346 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.66□□□□□ -1.5
CCNFP41002 ZNF705CP-201ENST00000530515 889 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 AL512310.1-201ENST00000548639 172 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.66□□□□□ -1.5
CCNFP41002 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.66□□□□□ -1.5
CCNFP41002 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.66□□□□□ -1.5
CCNFP41002 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 AC107954.1-201ENST00000565906 727 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC092121.1-201ENST00000569452 202 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.66□□□□□ -1.5
CCNFP41002 NF1P5-201ENST00000588287 448 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.66□□□□□ -1.5
CCNFP41002 AC010680.3-201ENST00000604215 520 ntBASIC5.66□□□□□ -1.5
CCNFP41002 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 AL136295.6-201ENST00000610486 658 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC010133.1-201ENST00000615809 842 ntBASIC5.66□□□□□ -1.5
CCNFP41002 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCNFP41002 AC092376.2-201ENST00000622621 4116 ntBASIC5.66□□□□□ -1.5
CCNFP41002 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.66□□□□□ -1.5
CCNFP41002 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCNFP41002 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCNFP41002 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCNFP41002 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.65□□□□□ -1.5
CCNFP41002 AC093849.1-201ENST00000563631 2209 ntBASIC5.65□□□□□ -1.5
CCNFP41002 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCNFP41002 SNORD56.2-201ENST00000363242 71 ntBASIC5.65□□□□□ -1.5
CCNFP41002 RNU6-853P-201ENST00000364306 107 ntBASIC5.65□□□□□ -1.5
CCNFP41002 RNA5SP500-201ENST00000364486 119 ntBASIC5.65□□□□□ -1.5
CCNFP41002 ARF4P3-201ENST00000397387 509 ntBASIC5.65□□□□□ -1.5
CCNFP41002 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.65□□□□□ -1.5
CCNFP41002 HMGN1P20-201ENST00000411849 300 ntBASIC5.65□□□□□ -1.5
CCNFP41002 HMGB3P20-201ENST00000417997 600 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNFP41002 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNFP41002 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNFP41002 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNFP41002 CEACAMP9-201ENST00000442990 513 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.65□□□□□ -1.5
CCNFP41002 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNFP41002 CBX1P2-201ENST00000453841 458 ntBASIC5.65□□□□□ -1.5
CCNFP41002 RPS20P32-201ENST00000456044 356 ntBASIC5.65□□□□□ -1.5
CCNFP41002 RPL7P15-201ENST00000461190 712 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC094085.1-201ENST00000468914 584 ntBASIC5.65□□□□□ -1.5
CCNFP41002 RPS17P15-201ENST00000475609 349 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC023194.1-201ENST00000493084 308 ntBASIC5.65□□□□□ -1.5
CCNFP41002 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNFP41002 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNFP41002 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.65□□□□□ -1.5
CCNFP41002 AC022861.1-201ENST00000522981 663 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNFP41002 OR5BC1P-201ENST00000529327 739 ntBASIC5.65□□□□□ -1.5
CCNFP41002 CYCSP28-201ENST00000534284 321 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNFP41002 AC079600.1-201ENST00000550326 297 ntBASIC5.65□□□□□ -1.5
CCNFP41002 SUB1P2-201ENST00000556401 297 ntBASIC5.65□□□□□ -1.5
CCNFP41002 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.65□□□□□ -1.5
CCNFP41002 MIR7853-201ENST00000584820 132 ntBASIC5.65□□□□□ -1.5
CCNFP41002 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.65□□□□□ -1.5
CCNFP41002 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNFP41002 AC010338.1-201ENST00000621823 717 ntBASIC5.65□□□□□ -1.5
CCNFP41002 MIR1910-201ENST00000636955 80 ntBASIC5.65□□□□□ -1.5
CCNFP41002 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCNFP41002 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms