Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
HOXA9P31269 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXA9P31269 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC025125.1-201ENST00000624743 1922 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 RNU1-33P-201ENST00000364249 162 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 RNU1-89P-201ENST00000384592 164 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXA9P31269 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXA9P31269 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXA9P31269 RPL7P4-203ENST00000430239 730 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXA9P31269 YWHAQP9-201ENST00000445891 512 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC005229.2-201ENST00000456995 399 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC023050.1-201ENST00000498198 304 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC026427.2-201ENST00000506228 536 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 IGKV2D-23-201ENST00000518179 286 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC104997.1-201ENST00000519761 717 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC007458.1-201ENST00000542812 373 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC009101.1-201ENST00000568135 242 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC027281.1-201ENST00000574178 758 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXA9P31269 AC006116.10-201ENST00000591836 581 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC020914.4-201ENST00000597690 277 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC022387.2-201ENST00000604050 448 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AL160281.1-201ENST00000605307 311 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 AC010680.4-201ENST00000605334 543 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXA9P31269 AL355365.1-201ENST00000616480 294 ntBASIC3.84□□□□□ -1.79
HOXA9P31269 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXA9P31269 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HOXA9P31269 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXA9P31269 AC027287.1-201ENST00000553115 1453 ntBASIC3.84□□□□□ -1.8
HOXA9P31269 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
HOXA9P31269 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXA9P31269 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
HOXA9P31269 AC007823.1-201ENST00000569932 1566 ntBASIC3.84□□□□□ -1.8
HOXA9P31269 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HOXA9P31269 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HOXA9P31269 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 LINC02471-203ENST00000641941 4752 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 RNU6-819P-201ENST00000364116 107 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA9P31269 HLFP1-201ENST00000402375 499 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA9P31269 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA9P31269 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 AC114814.2-201ENST00000419195 485 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 PTP4A1P5-201ENST00000420305 455 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA9P31269 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 AL392003.1-201ENST00000434394 243 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 ANP32BP2-201ENST00000454525 545 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 AC069499.1-201ENST00000489433 509 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 NDUFB4P9-201ENST00000511646 388 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA9P31269 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA9P31269 SUMO2P20-201ENST00000520803 283 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 AL121766.1-201ENST00000547436 487 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXA9P31269 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC100814.1-201ENST00000606963 623 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA9P31269 AC104820.1-201ENST00000624183 307 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA9P31269 DCAF13P3-201ENST00000561147 1334 ntBASIC3.83□□□□□ -1.8
HOXA9P31269 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA9P31269 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA9P31269 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms