Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 VN1R90P-201ENST00000595717 726 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC009220.3-201ENST00000604318 586 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AP003973.1-201ENST00000604639 691 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AC018714.1-201ENST00000605028 208 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AC244258.1-201ENST00000637553 1071 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 NXPH1-205ENST00000602349 1953 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 Y_RNA.6-201ENST00000362350 114 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 SNORA5A-201ENST00000384111 134 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 HSPD1P16-201ENST00000402302 394 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 UBE2V1P3-201ENST00000439651 417 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 MTATP6P30-201ENST00000443540 664 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 DDX39BP2-208ENST00000453923 258 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AC138853.1-201ENST00000503549 823 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 RNU6-405P-201ENST00000516637 110 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.07□□□□□ -1.6
POLR2AP24928 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC103968.1-201ENST00000557841 573 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AC110743.1-201ENST00000584870 478 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AL160281.1-201ENST00000605307 311 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AL353621.2-201ENST00000605340 133 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 CR381670.1-201ENST00000624291 1693 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
POLR2AP24928 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
POLR2AP24928 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
POLR2AP24928 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
POLR2AP24928 AC133552.1-201ENST00000569988 4007 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.06□□□□□ -1.6
POLR2AP24928 Y_RNA.516-201ENST00000384541 124 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 RN7SKP159-201ENST00000410657 292 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.06□□□□□ -1.6
POLR2AP24928 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 RPS3AP12-201ENST00000443616 753 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 SEPT14P24-201ENST00000447236 180 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
POLR2AP24928 AL035407.2-201ENST00000454090 378 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 RPL7P22-201ENST00000466005 733 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 AC084024.2-201ENST00000503480 791 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 WBP1LP4-201ENST00000505043 344 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.06□□□□□ -1.6
POLR2AP24928 AC112230.1-201ENST00000604342 547 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 AC097505.1-201ENST00000610199 565 ntBASIC5.06□□□□□ -1.6
POLR2AP24928 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.06□□□□□ -1.6
POLR2AP24928 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
POLR2AP24928 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
POLR2AP24928 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
POLR2AP24928 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.06□□□□□ -1.6
POLR2AP24928 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.06□□□□□ -1.6
POLR2AP24928 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.05□□□□□ -1.6
POLR2AP24928 Y_RNA.3-201ENST00000362331 103 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 Y_RNA.465-201ENST00000384293 102 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 MIR449B-201ENST00000384995 97 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 SNORA26.8-201ENST00000391306 124 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 ENSAP1-201ENST00000392855 326 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 USP9YP33-201ENST00000412220 421 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 RAB9AP3-201ENST00000412737 573 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
POLR2AP24928 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
POLR2AP24928 AL138787.1-202ENST00000437804 898 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.05□□□□□ -1.6
POLR2AP24928 RAB9AP1-201ENST00000449393 573 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 RPL35AP15-201ENST00000468042 339 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 RPL7P49-201ENST00000471402 708 ntBASIC5.05□□□□□ -1.6
POLR2AP24928 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
POLR2AP24928 RPL9P33-201ENST00000484311 566 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms