Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VCANP13611 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VCANP13611 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VCANP13611 AL592045.1-201ENST00000429867 352 ntBASIC3.27□□□□□ -1.89
VCANP13611 ARL5AP4-201ENST00000430731 512 ntBASIC3.27□□□□□ -1.89
VCANP13611 SNORD109B-201ENST00000458961 67 ntBASIC3.27□□□□□ -1.89
VCANP13611 SNORD109A-201ENST00000459128 67 ntBASIC3.27□□□□□ -1.89
VCANP13611 AP006245.1-201ENST00000522549 120 ntBASIC3.27□□□□□ -1.89
VCANP13611 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
VCANP13611 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VCANP13611 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VCANP13611 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.27□□□□□ -1.89
VCANP13611 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VCANP13611 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 Y_RNA.338-201ENST00000365320 114 ntBASIC3.26□□□□□ -1.89
VCANP13611 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.26□□□□□ -1.89
VCANP13611 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.26□□□□□ -1.89
VCANP13611 DEFB109F-201ENST00000491870 277 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.26□□□□□ -1.89
VCANP13611 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.26□□□□□ -1.89
VCANP13611 AC026634.1-201ENST00000634369 198 ntBASIC3.26□□□□□ -1.89
VCANP13611 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.26□□□□□ -1.89
VCANP13611 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.26□□□□□ -1.89
VCANP13611 RPL23AP73-201ENST00000492507 471 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC099489.2-201ENST00000574976 260 ntBASIC3.26□□□□□ -1.89
VCANP13611 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
VCANP13611 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC3.26□□□□□ -1.89
VCANP13611 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCANP13611 AC105402.1-201ENST00000413336 545 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.26□□□□□ -1.89
VCANP13611 RPS4XP2-201ENST00000458402 793 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC021146.3-201ENST00000511911 260 ntBASIC3.26□□□□□ -1.89
VCANP13611 RN7SKP82-201ENST00000516786 223 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.26□□□□□ -1.89
VCANP13611 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.26□□□□□ -1.89
VCANP13611 KLKP1-201ENST00000595979 403 ntBASIC3.26□□□□□ -1.89
VCANP13611 AC015849.2-201ENST00000605738 409 ntBASIC3.26□□□□□ -1.89
VCANP13611 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 AP003122.3-201ENST00000526316 255 ntBASIC3.25□□□□□ -1.89
VCANP13611 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.25□□□□□ -1.89
VCANP13611 MIR3936-201ENST00000584304 110 ntBASIC3.25□□□□□ -1.89
VCANP13611 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.25□□□□□ -1.89
VCANP13611 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 ZNF658B-202ENST00000615961 3375 ntBASIC3.25□□□□□ -1.89
VCANP13611 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VCANP13611 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.25□□□□□ -1.89
VCANP13611 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VCANP13611 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.25□□□□□ -1.89
VCANP13611 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.25□□□□□ -1.89
VCANP13611 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.25□□□□□ -1.89
VCANP13611 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.25□□□□□ -1.89
VCANP13611 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.25□□□□□ -1.89
VCANP13611 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.25□□□□□ -1.89
VCANP13611 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
VCANP13611 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCANP13611 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.25□□□□□ -1.89
VCANP13611 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.25□□□□□ -1.89
VCANP13611 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.25□□□□□ -1.89
VCANP13611 AC103798.2-201ENST00000624292 632 ntBASIC3.25□□□□□ -1.89
VCANP13611 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 AL078595.2-201ENST00000605309 1780 ntBASIC3.24□□□□□ -1.89
VCANP13611 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.24□□□□□ -1.89
VCANP13611 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 MIR196B-201ENST00000384852 84 ntBASIC3.24□□□□□ -1.89
VCANP13611 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VCANP13611 HMGN2P23-201ENST00000456759 269 ntBASIC3.24□□□□□ -1.89
VCANP13611 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.24□□□□□ -1.89
VCANP13611 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.24□□□□□ -1.89
VCANP13611 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.24□□□□□ -1.89
VCANP13611 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.24□□□□□ -1.89
VCANP13611 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.24□□□□□ -1.89
VCANP13611 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.24□□□□□ -1.89
VCANP13611 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 AL591424.2-201ENST00000617023 128 ntBASIC3.24□□□□□ -1.89
VCANP13611 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCANP13611 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.24□□□□□ -1.89
VCANP13611 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VCANP13611 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VCANP13611 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VCANP13611 AL360182.1-201ENST00000397433 468 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms