Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD8P13378 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD8P13378 RNU5E-1-201ENST00000362477 120 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 Y_RNA.202-201ENST00000364083 110 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 Y_RNA.387-201ENST00000383918 102 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD8P13378 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 RPL35AP24-201ENST00000413846 330 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD8P13378 AC073136.2-201ENST00000417282 849 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 SETP9-201ENST00000423837 832 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AL139148.1-201ENST00000427122 680 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 CRIP1P1-201ENST00000427567 185 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 RPL7L1P9-201ENST00000431298 745 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 PTMAP6-201ENST00000439110 327 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 BX679664.2-201ENST00000439282 283 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 RN7SL860P-201ENST00000473738 223 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 RPS23P1-201ENST00000491662 432 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AC231760.1-201ENST00000498002 260 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD8P13378 RNU6-714P-201ENST00000516963 103 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD8P13378 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD8P13378 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXD8P13378 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 AC008737.2-201ENST00000599446 118 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 U1.34-201ENST00000618578 162 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 C2orf27A-204ENST00000623058 969 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 AC090617.10-201ENST00000624308 134 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXD8P13378 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD8P13378 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD8P13378 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXD8P13378 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.24□□□□□ -1.41
HOXD8P13378 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXD8P13378 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD8P13378 AL359922.3-201ENST00000624779 1670 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXD8P13378 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXD8P13378 U3.2-201ENST00000362981 210 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 Y_RNA.184-201ENST00000363884 108 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 Y_RNA.259-201ENST00000364619 101 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXD8P13378 RNA5SP339-201ENST00000390987 122 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RNU6-1158P-201ENST00000391167 107 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 BTBD10P2-201ENST00000404779 676 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 MTCYBP8-201ENST00000422855 651 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 PRUNEP1-201ENST00000425846 705 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD8P13378 HMGB3P10-201ENST00000434734 572 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD8P13378 IFNA20P-201ENST00000436840 528 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 GAPDHP58-201ENST00000438477 1006 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD8P13378 AL596266.1-201ENST00000448132 400 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD8P13378 RPS20P32-201ENST00000456044 356 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RPS15AP1-201ENST00000457423 391 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RNU7-63P-201ENST00000459054 62 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 SNORD19B-201ENST00000459623 84 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RPS27AP17-201ENST00000463344 455 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RN7SL222P-201ENST00000476452 299 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RPL7P39-201ENST00000481157 744 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 HIGD1AP14-201ENST00000507617 282 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 PCBP2P3-201ENST00000509726 843 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXD8P13378 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 AC044860.2-201ENST00000561005 179 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD8P13378 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXD8P13378 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 AC241377.1-201ENST00000619797 406 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 AL033543.1-201ENST00000623440 13454 ntBASIC6.23□□□□□ -1.41
HOXD8P13378 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HOXD8P13378 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXD8P13378 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms