Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL096803.3-201ENST00000609032 532 ntBASIC3.67□□□□□ -1.82
HOXC4P09017 AC243654.2-201ENST00000612843 443 ntBASIC3.67□□□□□ -1.82
HOXC4P09017 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC4P09017 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HOXC4P09017 OR5AC4P-202ENST00000642086 985 ntBASIC3.67□□□□□ -1.82
HOXC4P09017 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC4P09017 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC4P09017 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC4P09017 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC4P09017 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC4P09017 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HOXC4P09017 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC4P09017 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
HOXC4P09017 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
HOXC4P09017 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC4P09017 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXC4P09017 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 MIR670-201ENST00000390142 98 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC4P09017 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC4P09017 RPL7P31-201ENST00000450192 724 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AC025181.1-201ENST00000477507 416 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AP000926.1-201ENST00000479573 241 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AC005726.1-201ENST00000494679 427 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 NIPA2P2-201ENST00000496376 1083 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 FABP5P6-201ENST00000510588 409 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC4P09017 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXC4P09017 HMGN1P15-201ENST00000513870 295 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC4P09017 OR4C2P-201ENST00000530855 1064 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC4P09017 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC4P09017 AC092451.2-201ENST00000538746 658 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC4P09017 AL163642.2-201ENST00000604722 1019 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 AL391261.4-201ENST00000616012 481 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC4P09017 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXC4P09017 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
HOXC4P09017 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 AC100871.1-201ENST00000507871 1456 ntBASIC3.66□□□□□ -1.82
HOXC4P09017 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC4P09017 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXC4P09017 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXC4P09017 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
HOXC4P09017 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXC4P09017 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
HOXC4P09017 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC4P09017 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC4P09017 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC4P09017 AP000568.1-201ENST00000282964 442 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 SNORA71.3-201ENST00000362582 128 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 SNORD3H-201ENST00000384486 214 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 RNU6-244P-201ENST00000391028 104 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 AL357078.2-201ENST00000416486 427 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC4P09017 AC017083.1-201ENST00000428093 483 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 FTH1P6-201ENST00000430768 320 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 AC091286.1-201ENST00000431233 461 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 RPL17P35-201ENST00000432217 549 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC4P09017 AL691517.1-201ENST00000440833 1235 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 HMGB1P26-201ENST00000452520 628 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HOXC4P09017 SETP12-201ENST00000514068 805 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 RNU6-1004P-201ENST00000516584 111 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 OR7E13P-201ENST00000526052 910 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC4P09017 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXC4P09017 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXC4P09017 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC4P09017 AL590396.2-201ENST00000636511 1041 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
HOXC4P09017 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC4P09017 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC4P09017 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC4P09017 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC4P09017 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC4P09017 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
HOXC4P09017 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
HOXC4P09017 MIR421-201ENST00000365696 85 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC4P09017 RPL7P60-201ENST00000397636 735 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 AL512504.1-201ENST00000415494 778 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC4P09017 AC245054.1-201ENST00000420944 258 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 CR848007.2-201ENST00000424918 787 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 AL590623.1-201ENST00000427864 105 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 CYCSP4-201ENST00000429682 331 ntBASIC3.64□□□□□ -1.83
HOXC4P09017 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC4P09017 AF228730.2-201ENST00000438784 848 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms