Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 FP236240.3-201ENST00000623061 327 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC000123.2-201ENST00000623124 461 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AP006248.3-201ENST00000623580 594 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 CR392039.4-201ENST00000624968 501 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC058791.1-201ENST00000608412 3198 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 RAD1P1-201ENST00000231383 813 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 MTHFD2P2-201ENST00000407725 247 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 MIR1193-201ENST00000408109 78 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 RNU2-17P-201ENST00000410290 190 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 NDUFB1P1-201ENST00000435191 180 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 NDUFS5P3-201ENST00000450668 321 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 TPMTP4-201ENST00000450749 678 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 MRPS31P2-201ENST00000451581 518 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 CYCSP53-201ENST00000455540 265 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC010468.1-201ENST00000461022 817 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 GAPDHP36-201ENST00000480688 918 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC002456.2-201ENST00000509356 380 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 RN7SKP141-201ENST00000516167 338 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 IGKV2-36-201ENST00000519999 223 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 OR4U1P-201ENST00000554958 912 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 RN7SL703P-201ENST00000578485 302 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 VN1R85P-201ENST00000601587 426 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 SNORA62.6-201ENST00000606322 83 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 U6.48-201ENST00000618523 106 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 AC024023.1-201ENST00000624530 922 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 FRG1DP-201ENST00000635586 771 ntBASIC3.28□□□□□ -1.88
HLA-DPB1P04440 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPB1P04440 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
HLA-DPB1P04440 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 HMGB1P13-201ENST00000406019 642 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 TCEA1P4-201ENST00000415066 844 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC023128.2-201ENST00000420880 1223 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AL159169.1-201ENST00000421119 127 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AL353093.1-201ENST00000441292 436 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC097499.1-201ENST00000444277 208 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 ARL5AP2-201ENST00000444698 533 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AL162388.1-201ENST00000450912 352 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 RPL7L1P8-201ENST00000469911 741 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 MTND6P6-201ENST00000478031 263 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 FCF1P3-201ENST00000496394 590 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC020893.1-201ENST00000502452 580 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 USP9YP5-201ENST00000511770 630 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 SETP12-201ENST00000514068 805 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 DEFB109D-201ENST00000529497 240 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC011602.1-201ENST00000546484 331 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC025260.1-201ENST00000548858 430 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC084824.1-201ENST00000550917 1005 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms