Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
P04436 AC068254.2-201ENST00000623938 3577 ntBASIC3.55□□□□□ -1.84
P04436 MTCO1P18-201ENST00000455518 1419 ntBASIC3.55□□□□□ -1.84
P04436 AL512283.1-201ENST00000606756 1384 ntBASIC3.55□□□□□ -1.84
P04436 AC104446.1-201ENST00000613728 1321 ntBASIC3.55□□□□□ -1.84
P04436 RNU6-650P-201ENST00000365658 111 ntBASIC3.55□□□□□ -1.84
P04436 RNU6-1293P-201ENST00000384077 107 ntBASIC3.55□□□□□ -1.84
P04436 DNAJC19P6-201ENST00000401853 280 ntBASIC3.55□□□□□ -1.84
P04436 HMGB3P18-201ENST00000406327 590 ntBASIC3.55□□□□□ -1.84
P04436 AL603766.1-201ENST00000407763 664 ntBASIC3.55□□□□□ -1.84
P04436 PTGES3P2-201ENST00000407942 482 ntBASIC3.55□□□□□ -1.84
P04436 RNU4-27P-201ENST00000410889 139 ntBASIC3.55□□□□□ -1.84
P04436 AC092745.2-202ENST00000411880 369 ntBASIC3.55□□□□□ -1.84
P04436 NUP35P2-201ENST00000416748 943 ntBASIC3.55□□□□□ -1.84
P04436 AC004552.1-201ENST00000419089 348 ntBASIC3.55□□□□□ -1.84
P04436 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.55□□□□□ -1.84
P04436 AC092832.1-201ENST00000422934 400 ntBASIC3.55□□□□□ -1.84
P04436 VN1R42P-201ENST00000424651 344 ntBASIC3.55□□□□□ -1.84
P04436 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.55□□□□□ -1.84
P04436 AC096638.2-201ENST00000434965 711 ntBASIC3.55□□□□□ -1.84
P04436 USP9YP7-201ENST00000436723 430 ntBASIC3.55□□□□□ -1.84
P04436 USP9YP32-201ENST00000452432 430 ntBASIC3.55□□□□□ -1.84
P04436 RPS26P3-201ENST00000470205 348 ntBASIC3.55□□□□□ -1.84
P04436 AC090543.2-201ENST00000483963 348 ntBASIC3.55□□□□□ -1.84
P04436 AC004057.1-201ENST00000485827 348 ntBASIC3.55□□□□□ -1.84
P04436 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.55□□□□□ -1.84
P04436 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.55□□□□□ -1.84
P04436 SNX5P1-201ENST00000505757 1041 ntBASIC3.55□□□□□ -1.84
P04436 AC020593.1-201ENST00000507399 299 ntBASIC3.55□□□□□ -1.84
P04436 AC008565.1-201ENST00000509046 885 ntBASIC3.55□□□□□ -1.84
P04436 SAP18P1-201ENST00000512058 390 ntBASIC3.55□□□□□ -1.84
P04436 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.55□□□□□ -1.84
P04436 MTND2P26-201ENST00000528255 1029 ntBASIC3.55□□□□□ -1.84
P04436 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
P04436 AC139103.1-201ENST00000534696 1030 ntBASIC3.55□□□□□ -1.84
P04436 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.55□□□□□ -1.84
P04436 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
P04436 AC092474.3-201ENST00000603022 568 ntBASIC3.55□□□□□ -1.84
P04436 AC005776.1-201ENST00000603164 290 ntBASIC3.55□□□□□ -1.84
P04436 AL139286.1-201ENST00000604465 483 ntBASIC3.55□□□□□ -1.84
P04436 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.55□□□□□ -1.84
P04436 AC004825.2-201ENST00000616634 455 ntBASIC3.55□□□□□ -1.84
P04436 FRG1HP-204ENST00000617940 757 ntBASIC3.55□□□□□ -1.84
P04436 RNU6-156P-201ENST00000621869 107 ntBASIC3.55□□□□□ -1.84
P04436 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.55□□□□□ -1.84
P04436 AC073530.2-201ENST00000623987 261 ntBASIC3.55□□□□□ -1.84
P04436 FAM157B-203ENST00000639350 358 ntBASIC3.55□□□□□ -1.84
P04436 AC046144.1-201ENST00000478559 1853 ntBASIC3.55□□□□□ -1.84
P04436 AC097504.1-201ENST00000515103 2415 ntBASIC3.55□□□□□ -1.84
P04436 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
P04436 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
P04436 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.55□□□□□ -1.84
P04436 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
P04436 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
P04436 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
P04436 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
P04436 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
P04436 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
P04436 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
P04436 AL356489.2-201ENST00000566968 3528 ntBASIC3.54□□□□□ -1.84
P04436 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.54□□□□□ -1.84
P04436 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 ENSAP3-201ENST00000312710 333 ntBASIC3.54□□□□□ -1.84
P04436 RNU1-85P-201ENST00000364127 164 ntBASIC3.54□□□□□ -1.84
P04436 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.54□□□□□ -1.84
P04436 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
P04436 MIR93-201ENST00000385024 80 ntBASIC3.54□□□□□ -1.84
P04436 RNA5SP104-201ENST00000410989 118 ntBASIC3.54□□□□□ -1.84
P04436 AL158050.1-201ENST00000416077 457 ntBASIC3.54□□□□□ -1.84
P04436 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
P04436 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.54□□□□□ -1.84
P04436 ETF1P3-201ENST00000430422 1160 ntBASIC3.54□□□□□ -1.84
P04436 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.54□□□□□ -1.84
P04436 RRM2P4-201ENST00000441721 562 ntBASIC3.54□□□□□ -1.84
P04436 Z95327.1-201ENST00000446082 482 ntBASIC3.54□□□□□ -1.84
P04436 AC133473.1-201ENST00000455173 299 ntBASIC3.54□□□□□ -1.84
P04436 AP000873.1-201ENST00000463987 400 ntBASIC3.54□□□□□ -1.84
P04436 RN7SL542P-201ENST00000467147 294 ntBASIC3.54□□□□□ -1.84
P04436 AC087385.1-201ENST00000475062 312 ntBASIC3.54□□□□□ -1.84
P04436 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.54□□□□□ -1.84
P04436 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.54□□□□□ -1.84
P04436 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.54□□□□□ -1.84
P04436 AC018797.3-201ENST00000513388 1241 ntBASIC3.54□□□□□ -1.84
P04436 RN7SKP96-201ENST00000516948 297 ntBASIC3.54□□□□□ -1.84
P04436 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.54□□□□□ -1.84
P04436 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.54□□□□□ -1.84
P04436 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.54□□□□□ -1.84
P04436 CENPUP2-201ENST00000555897 1186 ntBASIC3.54□□□□□ -1.84
P04436 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.54□□□□□ -1.84
P04436 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.54□□□□□ -1.84
P04436 AC008638.3-201ENST00000603341 463 ntBASIC3.54□□□□□ -1.84
P04436 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 AL354760.1-201ENST00000608357 643 ntBASIC3.54□□□□□ -1.84
P04436 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
P04436 AC022079.2-201ENST00000619739 566 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms