Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL590808.1-201ENST00000618696 141 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.04□□□□□ -1.92
SPTA1P02549 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SPTA1P02549 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SPTA1P02549 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.03□□□□□ -1.92
SPTA1P02549 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SPTA1P02549 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.03□□□□□ -1.92
SPTA1P02549 RSL24D1P1-201ENST00000404972 493 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 AL133477.1-201ENST00000457472 514 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.03□□□□□ -1.92
SPTA1P02549 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.03□□□□□ -1.92
SPTA1P02549 TRAV15-201ENST00000556680 249 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.03□□□□□ -1.92
SPTA1P02549 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.03□□□□□ -1.92
SPTA1P02549 AL133457.1-201ENST00000564251 987 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.03□□□□□ -1.92
SPTA1P02549 AC124312.4-201ENST00000605533 310 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 Y_RNA.226-201ENST00000364337 114 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 BX119904.1-201ENST00000432026 348 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 SETP4-201ENST00000455717 868 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.03□□□□□ -1.92
SPTA1P02549 AC010374.2-201ENST00000512933 535 ntBASIC3.03□□□□□ -1.92
SPTA1P02549 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SPTA1P02549 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.93
SPTA1P02549 DDX6P1-205ENST00000441966 1436 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SPTA1P02549 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.02□□□□□ -1.93
SPTA1P02549 RN7SKP111-201ENST00000410349 271 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 SDCBPP2-201ENST00000424643 885 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 KCTD9P3-201ENST00000434597 1169 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 SETP12-201ENST00000514068 805 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 NDUFB9P3-201ENST00000521269 501 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.02□□□□□ -1.93
SPTA1P02549 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.02□□□□□ -1.93
SPTA1P02549 BNIP3P8-201ENST00000597863 560 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SPTA1P02549 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SPTA1P02549 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.02□□□□□ -1.93
SPTA1P02549 MTCO1P9-201ENST00000505577 1534 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.02□□□□□ -1.93
SPTA1P02549 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SPTA1P02549 GNG5P5-201ENST00000420444 220 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.02□□□□□ -1.93
SPTA1P02549 AL035404.1-201ENST00000497982 568 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 RNU6-991P-201ENST00000516168 107 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
SPTA1P02549 AL139174.1-201ENST00000531489 886 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 AC023161.2-201ENST00000551218 780 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.02□□□□□ -1.93
SPTA1P02549 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.02□□□□□ -1.93
SPTA1P02549 ATP1B3P1-201ENST00000605365 821 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 AC245100.7-201ENST00000609678 442 ntBASIC3.02□□□□□ -1.93
SPTA1P02549 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SPTA1P02549 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SPTA1P02549 AL451142.2-201ENST00000429076 2090 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 TCP1P3-201ENST00000414406 1498 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 NMD3P1-201ENST00000439704 1488 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SPTA1P02549 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.01□□□□□ -1.93
SPTA1P02549 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.01□□□□□ -1.93
SPTA1P02549 AC126389.1-201ENST00000477436 290 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.01□□□□□ -1.93
SPTA1P02549 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.01□□□□□ -1.93
SPTA1P02549 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.01□□□□□ -1.93
SPTA1P02549 AC026979.4-201ENST00000606555 645 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SPTA1P02549 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.01□□□□□ -1.93
SPTA1P02549 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.01□□□□□ -1.93
SPTA1P02549 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.01□□□□□ -1.93
SPTA1P02549 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.01□□□□□ -1.93
SPTA1P02549 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.01□□□□□ -1.93
SPTA1P02549 AC114781.4-201ENST00000513707 639 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 SNORA70.18-201ENST00000516696 98 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 IGLV3-26-201ENST00000520756 302 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.01□□□□□ -1.93
SPTA1P02549 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 AL512310.1-201ENST00000548639 172 ntBASIC3.01□□□□□ -1.93
SPTA1P02549 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.01□□□□□ -1.93
SPTA1P02549 AL592295.2-201ENST00000612578 206 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms