Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU1-75P-201ENST00000347264 129 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 AC093578.1-201ENST00000415219 368 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 AL645939.1-201ENST00000453429 797 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 RNU6-775P-201ENST00000459318 96 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 RPL6P9-201ENST00000466502 859 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 RN7SL442P-201ENST00000473804 320 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 MTND3P6-201ENST00000485242 339 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 HMGB1P21-201ENST00000502313 581 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 AC021678.1-201ENST00000505195 936 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 RNU6-551P-201ENST00000516661 103 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 MIR5186-201ENST00000577504 120 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AC006557.5-201ENST00000603126 811 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AL592494.3-201ENST00000609485 464 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AL356321.1-201ENST00000621360 228 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AC000123.2-201ENST00000623124 461 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CTDNEP1O95476 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTDNEP1O95476 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.86□□□□□ -1.79
CTDNEP1O95476 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 PTMAP2-201ENST00000397627 327 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 BX842559.1-201ENST00000419615 532 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 CYCSP43-201ENST00000438233 310 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC069277.2-201ENST00000454211 432 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 RPL7P15-201ENST00000461190 712 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 RPL7P38-201ENST00000488396 739 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC006499.5-201ENST00000505037 514 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 RNU1-143P-201ENST00000516296 146 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 EIF1AXP2-201ENST00000555940 413 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 U1.23-201ENST00000610293 146 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 RNU1-68P-201ENST00000615382 146 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 U1.39-201ENST00000621562 146 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 AL122126.1-201ENST00000546905 1318 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 RIOK3P1-201ENST00000418778 1528 ntBASIC3.85□□□□□ -1.79
CTDNEP1O95476 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDNEP1O95476 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTDNEP1O95476 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTDNEP1O95476 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTDNEP1O95476 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTDNEP1O95476 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 Y_RNA.62-201ENST00000362840 99 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTDNEP1O95476 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 RNA5SP239-201ENST00000410218 129 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 RPS20P25-201ENST00000412447 352 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 LIPT1P1-201ENST00000415870 1186 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 RPL37P1-201ENST00000432310 284 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 RN7SL293P-201ENST00000481765 281 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 RN7SKP116-201ENST00000516902 319 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 SOD1P3-201ENST00000518682 454 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 AC006133.1-201ENST00000617106 264 ntBASIC3.84□□□□□ -1.79
CTDNEP1O95476 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTDNEP1O95476 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
CTDNEP1O95476 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CTDNEP1O95476 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CTDNEP1O95476 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTDNEP1O95476 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTDNEP1O95476 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms