Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-2O95096 NXPH1-205ENST00000602349 1953 ntBASIC4.18□□□□□ -1.74
NKX2-2O95096 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NKX2-2O95096 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-2O95096 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-2O95096 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-2O95096 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
NKX2-2O95096 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-2O95096 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NKX2-2O95096 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-2O95096 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 OR4K15-201ENST00000305051 1216 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC079741.1-201ENST00000321498 212 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-2O95096 ATP5F1P2-201ENST00000398143 760 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AL049545.1-201ENST00000401856 572 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-2O95096 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 RPS12P10-201ENST00000427031 377 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AL772161.1-201ENST00000439130 476 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC073264.2-201ENST00000448886 166 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC090013.1-201ENST00000485147 480 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 GSTP1P1-201ENST00000548078 319 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-2O95096 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AL357094.1-201ENST00000603845 844 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC115621.1-201ENST00000604653 858 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC010201.1-201ENST00000605051 540 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AL133243.1-201ENST00000614487 366 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC100827.5-201ENST00000615883 426 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC090246.1-201ENST00000616499 426 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 AC007490.1-201ENST00000624321 703 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NKX2-2O95096 AC092435.4-201ENST00000623012 4159 ntBASIC4.17□□□□□ -1.74
NKX2-2O95096 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NKX2-2O95096 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-2O95096 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 AC009951.1-201ENST00000623674 2614 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-2O95096 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AP001273.1-201ENST00000624493 3152 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 OR10J6P-201ENST00000289731 930 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 SNRPEP3-201ENST00000338402 276 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 IL6STP1-201ENST00000346911 1020 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-2O95096 TIMM9P2-201ENST00000419324 266 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 UQCRBP1-201ENST00000421129 336 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX2-2O95096 KCTD10P1-201ENST00000434203 625 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 AL357520.1-201ENST00000441557 453 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-2O95096 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AC104073.1-201ENST00000451988 151 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 RPL18AP17-201ENST00000455326 198 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-2O95096 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-2O95096 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-2O95096 AP003461.1-201ENST00000528866 78 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 OR4A45P-201ENST00000529954 901 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 AP006289.1-201ENST00000538089 277 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX2-2O95096 MTND3P12-201ENST00000559068 328 ntBASIC4.16□□□□□ -1.74
NKX2-2O95096 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms