Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 RN7SKP299-201ENST00000606679 301 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC234782.5-201ENST00000617723 324 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC073534.2-201ENST00000620377 381 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC067931.1-201ENST00000624190 671 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 SPATA2P1-201ENST00000431223 2055 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 RNU6-553P-201ENST00000364047 96 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 SNORA62-201ENST00000365493 153 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC068538.1-201ENST00000376856 336 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SMAD6O43541 RNU1-63P-201ENST00000383902 164 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 UBE2V1P10-201ENST00000414685 269 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.51□□□□□ -1.69
SMAD6O43541 COX6CP17-201ENST00000421389 185 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC019178.2-201ENST00000423595 505 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC129850.1-201ENST00000436203 508 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 MTND4P18-201ENST00000447010 465 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC097262.1-201ENST00000452559 548 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC005912.1-201ENST00000495392 255 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC021146.7-201ENST00000509604 775 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 OR5H4P-201ENST00000510851 923 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC093840.1-201ENST00000511599 336 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC015795.1-201ENST00000513669 327 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 DEFB130C-202ENST00000530001 230 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 AC022662.1-201ENST00000580252 331 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 ZNF415P1-201ENST00000582279 1166 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC090616.2-202ENST00000584248 222 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.51□□□□□ -1.69
SMAD6O43541 AL031985.2-201ENST00000600955 480 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AP002360.4-201ENST00000606980 481 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC239868.4-201ENST00000608318 671 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC073114.1-201ENST00000612027 490 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.51□□□□□ -1.69
SMAD6O43541 MLECP1-201ENST00000615893 709 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC090246.1-201ENST00000616499 426 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC116165.2-201ENST00000616705 206 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC000123.2-201ENST00000623124 461 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC092192.1-201ENST00000633154 1018 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.51□□□□□ -1.69
SMAD6O43541 AL596275.2-204ENST00000641628 552 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 AL596275.2-206ENST00000641957 626 ntBASIC4.51□□□□□ -1.69
SMAD6O43541 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.51□□□□□ -1.69
SMAD6O43541 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMAD6O43541 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.5□□□□□ -1.69
SMAD6O43541 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.5□□□□□ -1.69
SMAD6O43541 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMAD6O43541 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMAD6O43541 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
SMAD6O43541 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMAD6O43541 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.5□□□□□ -1.69
SMAD6O43541 OR5P1P-201ENST00000299512 925 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SMAD6O43541 MIR331-201ENST00000362302 94 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SMAD6O43541 MIR921-201ENST00000401133 56 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 MTND4LP11-201ENST00000422184 280 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 RAC1P8-201ENST00000427086 527 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.5□□□□□ -1.69
SMAD6O43541 MTND1P32-201ENST00000433043 938 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.5□□□□□ -1.69
SMAD6O43541 UBE2V1P3-201ENST00000439651 417 ntBASIC4.5□□□□□ -1.69
SMAD6O43541 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMAD6O43541 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.5□□□□□ -1.69
SMAD6O43541 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.5□□□□□ -1.69
SMAD6O43541 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMAD6O43541 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms