Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXA2O43364 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
HOXA2O43364 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HOXA2O43364 MIR19A-201ENST00000384878 82 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXA2O43364 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXA2O43364 RSL24D1P6-201ENST00000426934 401 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 RPL36P19-201ENST00000430744 301 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 FTH1P10-202ENST00000430907 550 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXA2O43364 RPL21P89-201ENST00000444021 467 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXA2O43364 CBX1P2-201ENST00000453841 458 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC005229.2-201ENST00000456995 399 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 RPS20P21-201ENST00000466859 343 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 RN7SL369P-201ENST00000477138 299 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC012123.2-201ENST00000485809 248 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 RN7SL561P-201ENST00000488553 281 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 HIGD1AP14-201ENST00000507617 282 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AC008526.1-201ENST00000509149 338 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 Y_RNA.721-201ENST00000517207 102 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 CYCSP22-201ENST00000517555 339 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC105031.1-201ENST00000518550 476 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AC036111.2-201ENST00000533247 901 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AC135001.1-201ENST00000544546 283 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.94□□□□□ -1.3
HOXA2O43364 AC018889.1-201ENST00000605372 397 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AL596245.1-201ENST00000618994 362 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AC138627.2-201ENST00000624202 601 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXA2O43364 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXA2O43364 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HOXA2O43364 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXA2O43364 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXA2O43364 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.94□□□□□ -1.3
HOXA2O43364 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.93□□□□□ -1.3
HOXA2O43364 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXA2O43364 MTND5P27-201ENST00000428871 1720 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXA2O43364 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HOXA2O43364 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HOXA2O43364 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXA2O43364 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HOXA2O43364 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HOXA2O43364 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
HOXA2O43364 AP005432.1-201ENST00000580891 3485 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 Y_RNA.389-201ENST00000383924 113 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 RNU6-278P-201ENST00000390945 109 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC080125.1-201ENST00000414888 684 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 RPL7P10-201ENST00000417407 739 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.93□□□□□ -1.3
HOXA2O43364 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC008267.5-201ENST00000424928 265 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 RPL7P28-201ENST00000437739 740 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 TRBV1-201ENST00000476502 284 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC020893.1-201ENST00000502452 580 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC116655.1-201ENST00000508324 901 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 RNA5SP206-201ENST00000516703 121 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC024224.1-201ENST00000538284 609 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 OR8R1P-201ENST00000543943 764 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 MIR4701-201ENST00000583094 63 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 GLYATL1P2-202ENST00000588046 902 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC020634.1-201ENST00000608701 549 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC243654.2-201ENST00000612843 443 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC107871.2-201ENST00000612894 502 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.93□□□□□ -1.3
HOXA2O43364 AC078938.1-201ENST00000620993 318 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC243312.2-201ENST00000623340 601 ntBASIC6.93□□□□□ -1.3
HOXA2O43364 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.93□□□□□ -1.3
HOXA2O43364 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.93□□□□□ -1.3
HOXA2O43364 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HOXA2O43364 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HOXA2O43364 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HOXA2O43364 TATDN2P3-201ENST00000452855 3665 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms