Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SDCBPO00560 MFSD8-233ENST00000641482 4860 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SDCBPO00560 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SDCBPO00560 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 RNU6-697P-201ENST00000363348 107 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 RNU6-328P-201ENST00000390887 106 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 RN7SKP202-201ENST00000410439 330 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC245291.1-201ENST00000419501 328 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC048351.1-201ENST00000420064 602 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.88□□□□□ -1.95
SDCBPO00560 AL049610.1-201ENST00000423374 372 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 EIF2S2P3-201ENST00000428356 999 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AL035246.1-201ENST00000433554 1255 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 AC008264.1-201ENST00000447612 367 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC125238.1-201ENST00000448842 249 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.88□□□□□ -1.95
SDCBPO00560 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.88□□□□□ -1.95
SDCBPO00560 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.88□□□□□ -1.95
SDCBPO00560 CALM1P2-201ENST00000452941 448 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.88□□□□□ -1.95
SDCBPO00560 HMGN2P7-201ENST00000456186 273 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 MTCYBP14-201ENST00000457471 715 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC018635.1-201ENST00000468292 1030 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 LARP7P4-201ENST00000481075 878 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC005912.1-201ENST00000495392 255 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 RN7SKP289-201ENST00000517244 295 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 NPM1P52-201ENST00000518264 846 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.88□□□□□ -1.95
SDCBPO00560 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.88□□□□□ -1.95
SDCBPO00560 AC006518.1-201ENST00000541449 943 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.88□□□□□ -1.95
SDCBPO00560 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.88□□□□□ -1.95
SDCBPO00560 AP000919.1-202ENST00000581139 1264 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC067852.3-201ENST00000589177 561 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC083899.3-201ENST00000603413 594 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC005229.3-201ENST00000603438 323 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC019131.2-201ENST00000609071 870 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AL450489.1-201ENST00000612071 468 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.88□□□□□ -1.95
SDCBPO00560 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.88□□□□□ -1.95
SDCBPO00560 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.88□□□□□ -1.95
SDCBPO00560 AC093908.1-201ENST00000623125 8092 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 AC032011.1-201ENST00000611703 1549 ntBASIC2.88□□□□□ -1.95
SDCBPO00560 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SDCBPO00560 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.87□□□□□ -1.95
SDCBPO00560 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 SNORD56.3-201ENST00000363507 71 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 SNORA73.2-201ENST00000364946 201 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 RNU1-64P-201ENST00000365443 163 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SDCBPO00560 AL445189.1-201ENST00000405722 338 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 Z99755.1-201ENST00000414048 380 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 PTP4A1P5-201ENST00000420305 455 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 BX890604.2-201ENST00000427883 474 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC093716.1-201ENST00000435923 377 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 CEACAMP4-201ENST00000457676 421 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC108078.3-201ENST00000502633 489 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.87□□□□□ -1.95
SDCBPO00560 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 SNORA70.17-201ENST00000516449 133 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC087888.1-201ENST00000550884 1254 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC106785.1-201ENST00000565935 262 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC020914.6-201ENST00000594327 272 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.87□□□□□ -1.95
SDCBPO00560 AC112230.1-201ENST00000604342 547 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC007620.3-201ENST00000608131 497 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AL096803.3-201ENST00000609032 532 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC012531.5-201ENST00000611375 151 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.87□□□□□ -1.95
SDCBPO00560 AL731566.2-201ENST00000618971 317 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.87□□□□□ -1.95
SDCBPO00560 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SDCBPO00560 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SDCBPO00560 ZNF285B-201ENST00000561698 1767 ntBASIC2.87□□□□□ -1.95
SDCBPO00560 AC090229.1-201ENST00000590983 1609 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.86□□□□□ -1.95
SDCBPO00560 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms