Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HSPE1P14-201ENST00000605812 302 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 ZNF663P-202ENST00000641770 1131 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC188H7C350 AC025031.4-201ENST00000621248 3271 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.21□□□□□ -1.73
CCDC188H7C350 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.21□□□□□ -1.73
CCDC188H7C350 MFSD8-220ENST00000641243 1422 ntBASIC4.21□□□□□ -1.73
CCDC188H7C350 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
CCDC188H7C350 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC188H7C350 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AC022893.2-201ENST00000564832 3296 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 SNORD35B-201ENST00000363660 87 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC188H7C350 RN7SKP182-201ENST00000410772 298 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC069218.2-201ENST00000411665 344 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC188H7C350 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC008280.1-201ENST00000418851 412 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 OR4F13P-201ENST00000428478 931 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 RPS26P56-201ENST00000444468 240 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 NDUFA5P7-201ENST00000452914 242 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC087385.1-201ENST00000475062 312 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 RPL7P24-201ENST00000493052 752 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AC083829.1-201ENST00000503756 657 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC011352.3-201ENST00000505162 593 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 NDUFS5P6-201ENST00000529136 295 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 DEFB109D-201ENST00000529497 240 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 CENPUP2-201ENST00000555897 1186 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC044913.1-201ENST00000557200 430 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AGGF1P8-201ENST00000562979 1000 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC188H7C350 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 AL020997.3-201ENST00000602843 359 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC073387.2-201ENST00000604797 784 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AC010680.4-201ENST00000605334 543 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 OR6R2P-201ENST00000609216 300 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 AL591424.2-201ENST00000617023 128 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AC244205.2-202ENST00000635781 342 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC188H7C350 AC025125.1-201ENST00000624743 1922 ntBASIC4.21□□□□□ -1.74
CCDC188H7C350 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC188H7C350 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC188H7C350 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC188H7C350 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC188H7C350 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC188H7C350 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC188H7C350 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RNU1-18P-201ENST00000363062 164 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC188H7C350 RNU6-1257P-201ENST00000384625 110 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RNU6-925P-201ENST00000384629 104 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RNU6-298P-201ENST00000390888 96 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC188H7C350 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC188H7C350 AC073264.1-201ENST00000411508 416 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RPL31P45-201ENST00000419532 356 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RWDD4P2-201ENST00000426392 563 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC188H7C350 USP9YP9-201ENST00000429406 715 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC188H7C350 FABP3P2-201ENST00000453169 399 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 HMGN3P1-201ENST00000453847 193 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AC010307.1-201ENST00000467206 836 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC188H7C350 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC188H7C350 AC012170.1-201ENST00000495139 359 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AC048346.1-201ENST00000510247 144 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 RNU6-276P-201ENST00000516114 96 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC188H7C350 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC188H7C350 IGLVIV-53-201ENST00000520107 367 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC188H7C350 AC087897.1-201ENST00000550134 156 ntBASIC4.2□□□□□ -1.74
CCDC188H7C350 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC188H7C350 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC188H7C350 MTCYBP28-201ENST00000566728 1132 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms