Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AL136520.1-201ENST00000600311 1322 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 MIR525-201ENST00000384978 85 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 SNORD65C-201ENST00000390962 71 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 RPS15AP40-201ENST00000419621 391 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 snoU13.7-201ENST00000459220 104 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC104629.1-201ENST00000494226 508 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 HPRT1P2-201ENST00000505250 544 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC006499.6-201ENST00000511169 607 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 RNU5A-7P-201ENST00000515979 116 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 IGLV3-26-201ENST00000520756 302 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 MTND2P26-201ENST00000528255 1029 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 CENPUP2-201ENST00000555897 1186 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 MIR4789-201ENST00000577469 82 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 MIR7702-201ENST00000621931 59 ntBASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
NPIPA2E9PIF3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC011978.2-201ENST00000569835 2054 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 OR11H4-201ENST00000315409 1082 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 ENSAP1-201ENST00000392855 326 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC069282.1-201ENST00000411911 526 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 OR8G2P-201ENST00000412796 908 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 RPL36AP36-201ENST00000418616 301 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 RPL21P89-201ENST00000444021 467 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 HSFY3P-201ENST00000444242 1191 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC233982.1-201ENST00000451247 436 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 RPL21P18-201ENST00000469899 480 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 RN7SL604P-201ENST00000492589 296 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 TPT1P3-201ENST00000492841 512 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 USP9YP5-201ENST00000511770 630 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AC108064.1-201ENST00000513791 460 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 MTCO3P27-201ENST00000514397 196 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 AP003355.1-201ENST00000518956 587 ntBASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA2E9PIF3 MED28P5-201ENST00000528254 438 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms