Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MTND3P19-201ENST00000603825 345 ntBASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RNU6-156P-201ENST00000621869 107 ntBASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL158163.1-201ENST00000603915 1649 ntBASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV4-1A0A0J9YWV2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC079741.1-201ENST00000321498 212 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SNORD116-23-201ENST00000384645 92 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SNORD65.1-201ENST00000390889 71 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 TMSB4XP8-201ENST00000402089 135 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ERHP2-201ENST00000402323 299 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 TMSB4XP6-201ENST00000415187 135 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL391219.1-201ENST00000422570 483 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 TMSB4XP1-201ENST00000424567 135 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 HMGB3P5-201ENST00000428894 612 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 CR769776.1-201ENST00000441254 787 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC004022.1-201ENST00000447766 1066 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 COX6CP18-201ENST00000448769 222 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 VN1R40P-201ENST00000455196 941 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPL36AP13-201ENST00000457490 317 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 NF1P3-201ENST00000457709 450 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC005410.1-202ENST00000460347 485 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RN7SL826P-201ENST00000479724 288 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 VPS26AP1-201ENST00000483197 979 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC011037.1-201ENST00000483964 558 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RPS3AP6-201ENST00000484430 795 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 RN7SL691P-201ENST00000494487 301 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC084024.2-201ENST00000503480 791 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC114322.1-201ENST00000506771 926 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SOD1P3-201ENST00000518682 454 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP001317.1-201ENST00000531194 960 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 OR5D15P-201ENST00000531671 942 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC023813.2-201ENST00000564321 469 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC104662.1-201ENST00000604448 511 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AP003973.1-201ENST00000604639 691 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC090948.1-201ENST00000607464 549 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC211433.2-201ENST00000608433 387 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 FAM27D1-201ENST00000612308 341 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC024257.5-201ENST00000612739 531 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC090246.1-201ENST00000616499 426 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MIR6864-201ENST00000617935 70 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 MIR7703-201ENST00000620784 77 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC103858.2-201ENST00000621471 543 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ERCC6-202ENST00000374127 1782 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 AC107081.3-201ENST00000612715 2034 ntBASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TRBV4-1A0A0J9YWV2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL049555.1-201ENST00000562834 1933 ntBASIC3.78□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNU6-582P-201ENST00000362989 107 ntBASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNA5SP513-201ENST00000364648 118 ntBASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNU6-636P-201ENST00000384598 107 ntBASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 MIR513B-201ENST00000385136 84 ntBASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 FAR2P2-201ENST00000413041 594 ntBASIC3.77□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC008280.1-201ENST00000418851 412 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms