Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
CSNK1G3Q9Y6M4 Z82217.1-201ENST00000625157 8149 ntBASIC4.06□□□□□ -1.76
CSNK1G3Q9Y6M4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSNK1G3Q9Y6M4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSNK1G3Q9Y6M4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CSNK1G3Q9Y6M4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSNK1G3Q9Y6M4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC009229.4-201ENST00000623854 1947 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 RN7SKP44-201ENST00000363602 316 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AL359837.1-201ENST00000381357 287 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 SNORD65C-201ENST00000390962 71 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC073335.1-201ENST00000427776 363 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC007389.2-201ENST00000434630 306 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 EXOSC3P1-201ENST00000448649 500 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 ABCF2P2-201ENST00000450549 296 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC091153.1-201ENST00000466297 402 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC026414.1-201ENST00000504046 698 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC108471.1-201ENST00000513977 287 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC091163.3-201ENST00000518269 1144 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 OR7E13P-201ENST00000526052 910 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 MTND1P24-201ENST00000552175 861 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC011611.5-201ENST00000552477 578 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 NPM1P47-201ENST00000560843 856 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AL360157.1-201ENST00000565962 87 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC018552.3-201ENST00000567416 561 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 RN7SL703P-201ENST00000578485 302 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC022884.3-201ENST00000579571 248 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 MIR3158-1-201ENST00000583596 81 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AL606490.9-201ENST00000603331 271 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AP002906.1-201ENST00000603405 233 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AL078595.3-201ENST00000623815 1166 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 AC116667.1-201ENST00000604855 2072 ntBASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CSNK1G3Q9Y6M4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC018555.1-201ENST00000567548 1980 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 RNU6-98P-201ENST00000384173 107 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 MIR513A2-201ENST00000385249 127 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC092638.1-201ENST00000411966 1275 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 USP9YP21-201ENST00000420603 432 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 ELOCP10-201ENST00000440624 327 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 MTCO1P53-201ENST00000441633 699 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 RNU7-27P-201ENST00000459281 62 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 RPL21P71-201ENST00000465598 459 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 RN7SL542P-201ENST00000467147 294 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 SNORA67.7-201ENST00000516664 135 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC023632.4-201ENST00000517783 191 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC020914.4-201ENST00000597690 277 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 ELOCP34-201ENST00000604436 327 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC116447.1-201ENST00000613153 453 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AC006133.1-201ENST00000617106 264 ntBASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CSNK1G3Q9Y6M4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms