Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AL109653.1-201ENST00000603091 248 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 AL133507.1-201ENST00000605269 557 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 AC099676.1-201ENST00000608886 657 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 AC087385.3-201ENST00000620477 187 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 AP001784.1-201ENST00000624107 428 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 AC092608.3-201ENST00000625017 386 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 AC007671.2-201ENST00000637344 619 ntBASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
MRPS28Q9Y2Q9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC105074.1-201ENST00000623380 3095 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 NACA3P-201ENST00000359690 648 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 RNU6-560P-201ENST00000364007 108 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 SKINT1L-201ENST00000401057 817 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 RPL23AP48-201ENST00000406913 488 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MIR1911-201ENST00000410783 80 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC114814.2-201ENST00000419195 485 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 PTP4A1P5-201ENST00000420305 455 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 USP9YP26-201ENST00000421008 661 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AL049745.1-201ENST00000433953 286 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 BX248409.1-201ENST00000455497 255 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC079804.1-201ENST00000461922 436 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC010469.1-201ENST00000463864 576 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 RPL23AP12-201ENST00000467573 473 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 VWA8P1-201ENST00000510889 176 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 IGKV1-32-201ENST00000519290 311 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC010306.1-201ENST00000523223 1117 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 DUXAP1-201ENST00000556632 463 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MIR4436B2-201ENST00000581415 91 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MIR4436B1-201ENST00000583272 91 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AP001542.2-201ENST00000593141 364 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MRPS35P3-201ENST00000603189 709 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 Z99497.2-201ENST00000603634 310 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC010680.3-201ENST00000604215 520 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC021749.1-201ENST00000604322 607 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 DPRXP5-201ENST00000604662 539 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AL031666.3-201ENST00000609320 1006 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC009090.3-201ENST00000616553 565 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC007490.1-201ENST00000624321 703 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 OR2L1P-202ENST00000641567 1023 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC018529.3-201ENST00000624212 2254 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 AC011266.1-201ENST00000624119 3569 ntBASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPS28Q9Y2Q9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 MFSD8-242ENST00000641690 4199 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC025263.3-201ENST00000622965 1396 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 Y_RNA.408-201ENST00000383987 102 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms