Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 RNU4-31P-201ENST00000384211 141 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 RNU1-13P-201ENST00000384499 162 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 RN7SKP285-201ENST00000410137 318 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC069218.2-201ENST00000411665 344 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 COX6CP17-201ENST00000421389 185 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 XKRYP6-201ENST00000440468 1116 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 XKRYP3-201ENST00000442113 1116 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 MORF4L1P4-201ENST00000450245 976 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 HMGB3P30-201ENST00000457863 606 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AP000893.1-201ENST00000474462 794 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 TPT1P3-201ENST00000492841 512 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 UBE2CP3-201ENST00000502715 450 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 HMGB1P3-201ENST00000502802 616 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC090071.1-201ENST00000507713 644 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 RN7SKP60-201ENST00000516985 239 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 CDH12P4-201ENST00000517835 295 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 CDH12P3-201ENST00000517935 295 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 CDH12P1-201ENST00000518435 295 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 RAB9BP1-201ENST00000519581 626 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 MTND5P21-201ENST00000531961 522 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 BNIP3P38-201ENST00000601117 544 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC245389.2-201ENST00000616023 576 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC243756.2-201ENST00000618406 463 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC242843.1-201ENST00000618702 573 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AL357559.1-201ENST00000622228 274 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC006065.5-201ENST00000623427 349 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 AC138649.5-201ENST00000637456 137 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
VAPAQ9P0L0 SEPT7P7-201ENST00000420492 1301 ntBASIC3.42□□□□□ -1.86
VAPAQ9P0L0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 RNA5SP167-201ENST00000365461 116 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 RPL7P60-201ENST00000397636 735 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 HNRNPDP2-201ENST00000406475 478 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 MTND4P22-201ENST00000413116 1169 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AL139247.1-201ENST00000422768 325 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 YY1P1-201ENST00000427625 668 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC008065.1-201ENST00000428525 348 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AL117339.2-201ENST00000430475 180 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC016712.1-201ENST00000431088 378 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC023347.2-201ENST00000433994 462 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC010655.1-201ENST00000449336 292 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 SBDSP1-204ENST00000453858 737 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 SNRPGP3-201ENST00000469405 227 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 TMED11P-201ENST00000479478 690 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 SUMO1P1-201ENST00000497904 306 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 RN7SKP234-201ENST00000517173 224 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 CYCSP30-201ENST00000546447 172 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC087499.8-201ENST00000578406 226 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC006254.3-201ENST00000603353 884 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC006077.1-201ENST00000604746 343 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC084036.1-201ENST00000609190 508 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC121761.2-201ENST00000617300 689 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AC092628.2-201ENST00000622492 339 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 MIR6830-201ENST00000636015 70 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 AP001148.1-201ENST00000624124 2359 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 MTND4P31-201ENST00000425607 1343 ntBASIC3.41□□□□□ -1.86
VAPAQ9P0L0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VAPAQ9P0L0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms