Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS4Q9NQG7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC017007.4-201ENST00000503353 1352 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 Y_RNA.110-201ENST00000363220 99 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 ATF1P1-201ENST00000406040 927 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 HMGB3P18-201ENST00000406327 590 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AL512661.1-201ENST00000434586 1253 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 NOTCH2P1-201ENST00000443481 624 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 RPL37P3-201ENST00000456825 293 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 RPL36AP13-201ENST00000457490 317 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 OR9M1P-201ENST00000459641 921 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 RPS26P15-201ENST00000488067 348 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC008628.1-201ENST00000508663 265 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 TRMT10BP1-201ENST00000519377 943 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 OR4A2P-201ENST00000527276 913 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 OR4C2P-201ENST00000530855 1064 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC104229.1-201ENST00000561364 255 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 RNA5SP108-201ENST00000605921 117 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 FP236240.3-201ENST00000623061 327 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 AC097372.4-201ENST00000625025 466 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS4Q9NQG7 HSPA8P19-201ENST00000505359 1517 ntBASIC4.16□□□□□ -1.74
HPS4Q9NQG7 LINC02471-203ENST00000641941 4752 ntBASIC4.15□□□□□ -1.74
HPS4Q9NQG7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HPS4Q9NQG7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.15□□□□□ -1.74
HPS4Q9NQG7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HPS4Q9NQG7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.15□□□□□ -1.74
HPS4Q9NQG7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HPS4Q9NQG7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HPS4Q9NQG7 AL353746.1-201ENST00000566293 6881 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 MIR208A-201ENST00000362287 71 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 SNORA73.2-201ENST00000364946 201 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 SNORA70.4-201ENST00000365509 134 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 MIR124-3-201ENST00000384866 87 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AL590704.1-201ENST00000402856 794 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 RAB9AP3-201ENST00000412737 573 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 HMGB3P31-201ENST00000413333 595 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 PRELID3BP11-201ENST00000414230 479 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC234782.4-201ENST00000417646 1048 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC092832.1-201ENST00000422934 400 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC093698.1-201ENST00000423843 571 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 RAB9AP1-201ENST00000449393 573 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 CYCSP53-201ENST00000455540 265 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AP000873.1-201ENST00000463987 400 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC078857.1-201ENST00000469870 667 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 RPL29P14-201ENST00000495837 428 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 OR5H4P-201ENST00000510851 923 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 Vault.1-201ENST00000516474 102 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 RNU6-352P-201ENST00000516908 107 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 MTND2P7-201ENST00000521337 640 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 RPL23AP87-202ENST00000573039 466 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC025627.2-201ENST00000576220 160 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 MIR432-201ENST00000606207 94 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 OR2BH1P-201ENST00000608850 864 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AL163051.2-201ENST00000618976 735 ntBASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms