Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 MTND5P3-201ENST00000438536 1800 ntBASIC3.56□□□□□ -1.84
CCNB1IP1Q9NPC3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AF127577.6-201ENST00000623352 2191 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 SNORA70C-201ENST00000384538 135 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 VTA1P1-201ENST00000414044 866 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AL159169.1-201ENST00000421119 127 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SL860P-201ENST00000473738 223 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC078918.1-201ENST00000498515 228 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SKP283-201ENST00000517197 270 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 ZNF192P1-203ENST00000565888 810 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC005242.1-201ENST00000585658 438 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 RNU4-89P-201ENST00000607443 133 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR378J-201ENST00000611988 109 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AL359535.1-201ENST00000612100 1087 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 AL391261.4-201ENST00000616012 481 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCNB1IP1Q9NPC3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 RNA5SP189-201ENST00000364920 115 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AL022722.2-201ENST00000402519 180 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 TPT1P2-201ENST00000413105 503 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 XKRYP4-201ENST00000414395 483 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS15AP40-201ENST00000419621 391 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC241520.1-201ENST00000422654 1099 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 MOB1AP1-201ENST00000430903 535 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 XKRYP5-201ENST00000449659 483 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 CFTRP1-201ENST00000456646 183 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 OR9N1P-202ENST00000494289 481 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SKP122-201ENST00000515923 296 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC008489.1-201ENST00000524271 483 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC067805.1-201ENST00000559344 470 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC018618.2-201ENST00000604770 446 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC079610.2-201ENST00000604818 690 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AL365503.1-201ENST00000605247 905 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC018754.1-201ENST00000607486 925 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 AC025016.1-201ENST00000616746 682 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR4496-201ENST00000635896 61 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 ZNF90P1-201ENST00000480493 1951 ntBASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNB1IP1Q9NPC3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 XPOTP1-201ENST00000443317 2398 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms