Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 RNA5SP509-201ENST00000364577 119 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 MIR124-3-201ENST00000384866 87 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 MIR153-1-201ENST00000384914 90 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 DNAJC19P6-201ENST00000401853 280 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 TPT1P2-201ENST00000413105 503 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 RPS15AP40-201ENST00000419621 391 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 ARL4AP4-201ENST00000434170 518 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 HMGB1P45-201ENST00000435986 653 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 YWHAZP8-201ENST00000436935 731 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 BX248409.1-201ENST00000455497 255 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC008379.1-201ENST00000463655 464 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 RN7SL303P-201ENST00000469773 251 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL132838.2-201ENST00000492041 314 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 RNU6-334P-201ENST00000517072 102 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC087369.1-201ENST00000520775 996 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AF279873.1-201ENST00000523393 313 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC092747.2-201ENST00000545069 983 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 MIR4284-201ENST00000578924 81 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 VN1R88P-201ENST00000596787 292 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC244505.7-201ENST00000599675 272 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 U7.8-201ENST00000619968 63 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 AL356118.1-201ENST00000635272 1078 ntBASIC4.05□□□□□ -1.76
DDX47Q9H0S4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX47Q9H0S4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 OR4K17-201ENST00000315543 1032 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 Y_RNA.625-201ENST00000411256 107 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RPL23AP26-201ENST00000412728 464 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RPL31P45-201ENST00000419532 356 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 TBCAP1-201ENST00000436520 327 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL158053.1-201ENST00000441503 453 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 HSFY3P-201ENST00000444242 1191 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RPL21P103-201ENST00000479921 488 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RPS27P23-201ENST00000487608 251 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RPS27AP13-201ENST00000498403 237 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 SNORA26.10-201ENST00000516427 141 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 RN7SKP277-201ENST00000516895 283 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 CYCSP29-201ENST00000533731 318 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC093510.2-201ENST00000562820 896 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC023824.3-201ENST00000569003 562 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC006116.5-201ENST00000591936 559 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC083899.3-201ENST00000603413 594 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL034351.1-201ENST00000605288 668 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AC021851.1-201ENST00000608537 1082 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL121890.3-201ENST00000618494 516 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 AL109659.3-201ENST00000624985 950 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 FAM157B-203ENST00000639350 358 ntBASIC4.04□□□□□ -1.76
DDX47Q9H0S4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX47Q9H0S4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms