Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC093014.1-201ENST00000548926 724 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC006960.3-201ENST00000561845 705 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC010680.4-201ENST00000605334 543 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AP001033.2-201ENST00000609701 1003 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC090912.3-201ENST00000609775 533 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 MIR1264-201ENST00000616374 69 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL354798.1-201ENST00000622505 329 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AC083865.1-201ENST00000636634 831 ntBASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
CCSER1Q9C0I3 MTCO1P14-201ENST00000441695 1559 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 MIR124-3-201ENST00000384866 87 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 PTP4A1P3-201ENST00000433661 420 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 RRM2P4-201ENST00000441721 562 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 TRBV8-2-201ENST00000475637 270 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 RN7SL132P-201ENST00000478131 296 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC022695.1-201ENST00000522089 237 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC007424.1-203ENST00000554613 687 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC090312.2-201ENST00000582687 378 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC020914.4-201ENST00000597690 277 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 FAM35DP-201ENST00000323387 2712 ntBASIC4.23□□□□□ -1.73
CCSER1Q9C0I3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 RNA5SP424-201ENST00000390988 115 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AL353692.2-201ENST00000407054 335 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 ARL2BPP3-201ENST00000421226 480 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 MTND2P6-201ENST00000455337 1030 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 RPS20P21-201ENST00000466859 343 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC010307.1-201ENST00000467206 836 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC022034.3-201ENST00000471393 478 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 OR52A4P-202ENST00000481634 799 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 MTATP6P22-201ENST00000507369 598 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 CBX3P5-201ENST00000552017 521 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC074029.1-201ENST00000552531 1044 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AL731537.2-201ENST00000561565 951 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AC006130.2-201ENST00000586202 326 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 OR4H6P-202ENST00000603819 340 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 RNU1-30P-201ENST00000606575 163 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms