Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 IGHV3-29-201ENST00000604817 344 ntBASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNTNAP3Q9BZ76 XPOTP1-201ENST00000443317 2398 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC235565.1-201ENST00000456962 1325 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 Y_RNA.106-201ENST00000363189 100 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RNY1P12-201ENST00000364251 105 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RNU4-48P-201ENST00000365559 182 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RNU6-171P-201ENST00000384354 107 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 NDUFS5P1-201ENST00000405668 289 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RPL21P50-201ENST00000417698 477 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 ARL5AP1-201ENST00000418991 388 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 CBX1P4-201ENST00000439415 457 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC009220.1-201ENST00000451614 275 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC092647.2-201ENST00000452998 253 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC090142.1-201ENST00000465776 462 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RPL23AP11-201ENST00000475260 469 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RPL7P43-201ENST00000478876 753 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC055733.3-201ENST00000505214 523 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RNA5SP438-201ENST00000516561 112 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 RN7SKP219-201ENST00000516825 296 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 IGHV3-76-201ENST00000522465 295 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC036111.2-201ENST00000533247 901 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC020765.1-201ENST00000604296 328 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AL354984.3-201ENST00000604803 325 ntBASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTNAP3Q9BZ76 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 MRE11P1-201ENST00000464884 2127 ntBASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTNAP3Q9BZ76 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms