Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AP002088.1-201ENST00000382740 395 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 CYB5AP4-201ENST00000396692 399 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RPL21P65-201ENST00000406094 466 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AL583834.1-201ENST00000406943 343 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RPL31P2-201ENST00000413849 377 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 HMGB3P23-201ENST00000414981 585 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC093578.1-201ENST00000415219 368 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 MTND2P15-201ENST00000418575 892 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 GLRXP1-201ENST00000423261 334 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 NDUFB1P1-201ENST00000435191 180 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AL356276.2-201ENST00000435919 558 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 HMGB1P45-201ENST00000435986 653 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RPL23AP22-201ENST00000437556 453 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 HIGD1AP11-201ENST00000438361 280 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RNU2-27P-201ENST00000516185 142 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 MRPL49P2-201ENST00000521066 465 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 RN7SL600P-201ENST00000581811 299 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC015726.1-201ENST00000602353 681 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC084373.1-201ENST00000603311 235 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC091488.1-201ENST00000604239 660 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC024940.4-201ENST00000605507 246 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AL355816.1-201ENST00000607951 118 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 MIR6500-201ENST00000622700 86 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 ZNF33CP-201ENST00000432492 2030 ntBASIC2.67□□□□□ -1.98
AP1S3Q96PC3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
AP1S3Q96PC3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 MIR30E-201ENST00000362104 92 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 MIR148B-201ENST00000362252 99 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 MIR607-201ENST00000385241 96 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 COX6CP2-201ENST00000444980 225 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 RPS4XP2-201ENST00000458402 793 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 PTGES3P3-201ENST00000511479 482 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 RN7SKP244-201ENST00000516513 307 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC245166.1-201ENST00000521012 253 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 NPM1P45-201ENST00000583151 559 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 BNIP3P38-201ENST00000601117 544 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC113194.1-201ENST00000606037 500 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 SNORA51-201ENST00000606420 132 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL451074.6-201ENST00000608512 729 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC079684.1-201ENST00000621405 437 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL732618.1-201ENST00000623251 301 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AC004972.1-201ENST00000623934 2209 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 GTF2H2B-203ENST00000508065 1432 ntBASIC2.66□□□□□ -1.98
AP1S3Q96PC3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
AP1S3Q96PC3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.65□□□□□ -1.98
AP1S3Q96PC3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
AP1S3Q96PC3 MTND4P34-201ENST00000572715 1371 ntBASIC2.65□□□□□ -1.98
AP1S3Q96PC3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms