Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CBX1P1-201ENST00000440184 427 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC116533.1-201ENST00000459748 321 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RN7SL303P-201ENST00000469773 251 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC109327.1-201ENST00000471666 403 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC119751.1-201ENST00000513357 765 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC016065.2-201ENST00000514530 444 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC099522.1-202ENST00000514718 367 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 PSMB7P1-201ENST00000556349 514 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC007599.1-201ENST00000568688 1174 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AL161729.3-201ENST00000603533 673 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC018754.1-201ENST00000607486 925 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RN7SL722P-201ENST00000617780 284 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 RN7SL565P-201ENST00000618246 284 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 AC004808.1-201ENST00000627671 721 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 OR4G3P-201ENST00000633500 913 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 SGO1P1-201ENST00000603525 1447 ntBASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM5Q96HC4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RNU1-85P-201ENST00000364127 164 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP509-201ENST00000364577 119 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP366-201ENST00000365454 123 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RNU6-468P-201ENST00000384003 109 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 HMGB3P19-201ENST00000403971 560 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC233981.1-201ENST00000423224 461 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 FAR2P4-202ENST00000425399 584 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RPL23AP46-201ENST00000438548 490 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AL645931.1-201ENST00000439737 410 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RAB11AP1-201ENST00000442978 646 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 CEACAMP9-201ENST00000442990 513 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RPL36AP13-201ENST00000457490 317 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 NAP1L1P3-201ENST00000462291 880 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC011276.1-201ENST00000469688 323 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC005726.1-201ENST00000494679 427 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC010460.2-201ENST00000509054 677 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 RNU5A-7P-201ENST00000515979 116 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 CDH12P4-201ENST00000517835 295 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 CDH12P3-201ENST00000517935 295 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 CDH12P1-201ENST00000518435 295 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 NIFKP8-201ENST00000560500 874 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 MIR4443-201ENST00000585052 53 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 VN1R79P-201ENST00000593540 513 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC068790.5-201ENST00000602741 355 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC104785.1-201ENST00000603220 588 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC090912.3-201ENST00000609775 533 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AC008759.3-201ENST00000613300 508 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 AL645568.2-201ENST00000432815 1337 ntBASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM5Q96HC4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.76
PDLIM5Q96HC4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PDLIM5Q96HC4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PDLIM5Q96HC4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PDLIM5Q96HC4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 MIR16-1-201ENST00000385271 89 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AL024507.1-201ENST00000412741 274 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AC013262.1-201ENST00000426710 252 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 BTF3P10-201ENST00000433415 495 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 AL050341.1-201ENST00000447743 313 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 RPL5P32-201ENST00000454085 879 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 FGF7P3-201ENST00000454645 303 ntBASIC4.08□□□□□ -1.76
PDLIM5Q96HC4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms