Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 RNU6-1119P-201ENST00000384349 108 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 SNRPEP2-201ENST00000397592 279 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL078604.1-201ENST00000404609 466 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 SDCBPP2-201ENST00000424643 885 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 USP9YP29-201ENST00000445112 563 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC109458.1-201ENST00000508858 316 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 CDC42P4-201ENST00000510507 563 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 GTF2IP22-201ENST00000554443 182 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 CYCSP2-201ENST00000558168 301 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC136618.2-201ENST00000575091 400 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 MIR4436B2-201ENST00000581415 91 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AP001004.1-201ENST00000582468 324 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 MIR4436B1-201ENST00000583272 91 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC087683.1-201ENST00000591187 441 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC011487.3-201ENST00000593607 453 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC020910.3-201ENST00000603701 874 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC010200.2-201ENST00000605098 235 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC107214.2-201ENST00000608204 634 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL049539.1-201ENST00000611964 459 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC009509.4-201ENST00000619202 509 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AL022401.1-201ENST00000619498 108 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 AC018755.4-201ENST00000619715 454 ntBASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTHRC1Q96CG8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 PABPC1P9-201ENST00000426076 1612 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AL445437.1-201ENST00000623157 3087 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC007066.1-201ENST00000392902 381 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 DEFB108C-201ENST00000400154 252 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 OR2AM1P-201ENST00000422137 422 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC099336.2-201ENST00000422457 254 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AL512649.1-201ENST00000428997 581 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 LARP1BP3-201ENST00000437229 869 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC112498.1-201ENST00000444401 332 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 SLC25A18P1-201ENST00000449385 454 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 SSXP1-201ENST00000453640 473 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC099560.2-201ENST00000457554 255 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 RN7SL558P-201ENST00000497468 299 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 MTND5P4-201ENST00000514978 288 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 RNU6-720P-201ENST00000516363 108 ntBASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.54□□□□□ -1.68
CTHRC1Q96CG8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms