Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 ENSAP3-201ENST00000312710 333 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 RNA5SP27-201ENST00000363839 119 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 GCNT6-201ENST00000379591 934 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 MIR124-3-201ENST00000384866 87 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC092745.2-202ENST00000411880 369 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 TCEA1P2-201ENST00000420496 906 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC008065.1-201ENST00000428525 348 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC073508.1-201ENST00000428866 656 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 ELOCP6-201ENST00000429066 328 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 ETF1P3-201ENST00000430422 1160 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 MTND4P15-201ENST00000437913 1033 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 SNORA71B-202ENST00000439232 272 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 NANOGP10-201ENST00000453325 895 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC099563.1-201ENST00000456086 418 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 ELOCP12-201ENST00000458706 328 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 RPL37P6-202ENST00000464216 403 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 VN1R105P-201ENST00000486595 910 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 PPM1AP1-201ENST00000502740 1135 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC005351.1-201ENST00000511152 786 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 OSBPL9P3-201ENST00000534523 595 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 ZNF92P2-201ENST00000600543 1059 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
UBE2E3Q969T4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBE2E3Q969T4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL158825.1-201ENST00000414735 521 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC073310.1-201ENST00000423226 1033 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL591419.1-201ENST00000427423 339 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC004975.1-201ENST00000428733 208 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 HMGB1P48-201ENST00000446155 598 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL353718.1-201ENST00000451028 517 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL645939.1-201ENST00000453429 797 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 RPS20P21-201ENST00000466859 343 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC018635.1-201ENST00000468292 1030 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 PRELID3BP7-201ENST00000503606 469 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC002456.2-201ENST00000509356 380 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC025768.1-201ENST00000510057 267 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC090312.2-201ENST00000582687 378 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC012254.4-201ENST00000588843 273 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC068790.5-201ENST00000602741 355 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AL671309.1-201ENST00000603750 544 ntBASIC3.61□□□□□ -1.83
UBE2E3Q969T4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.61□□□□□ -1.83
UBE2E3Q969T4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms