Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 EIF4EP5-201ENST00000528228 640 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC106785.3-201ENST00000564064 847 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 CYP2C60P-201ENST00000566088 139 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC008507.1-201ENST00000587506 734 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC006116.10-201ENST00000591836 581 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AP002088.1-201ENST00000382740 395 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 BTG3P1-201ENST00000435859 716 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 BTF3P5-201ENST00000457252 467 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 ARL2BPP6-201ENST00000512757 439 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 MIR4672-201ENST00000583126 81 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AC138932.5-201ENST00000617759 563 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 AL513302.2-201ENST00000562313 1842 ntBASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.52□□□□□ -1.85
SHROOM3Q8TF72 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 MFSD8-233ENST00000641482 4860 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 UBA52P6-201ENST00000399822 382 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 RNA5SP229-201ENST00000410809 99 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 RNA5SP31-201ENST00000411144 127 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AC097713.2-201ENST00000430199 356 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 EIF4A1P11-201ENST00000451239 222 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 VWA8P1-201ENST00000510889 176 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AP001542.1-201ENST00000591314 200 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AC010591.1-201ENST00000603941 649 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AC090337.1-201ENST00000579651 2074 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 RNU1-70P-201ENST00000362618 164 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 MTND6P32-201ENST00000457611 483 ntBASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHROOM3Q8TF72 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC093719.1-202ENST00000392735 373 ntBASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC109925.1-201ENST00000478069 331 ntBASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC111000.5-201ENST00000506559 1178 ntBASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC010285.3-201ENST00000511668 676 ntBASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC010486.1-201ENST00000511793 424 ntBASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC026801.2-201ENST00000515352 425 ntBASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHROOM3Q8TF72 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 SNORA68.2-201ENST00000391263 128 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AL138878.1-201ENST00000405131 347 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 RPL23AP48-201ENST00000406913 488 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 COTL1P1-201ENST00000422309 375 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 KC877373.1-201ENST00000479066 408 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SHROOM3Q8TF72 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms