Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RN7SKP118-201ENST00000364331 330 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RN7SKP55-201ENST00000364888 307 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RN7SKP292-201ENST00000365522 317 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-61P-201ENST00000365528 109 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-196P-201ENST00000384315 107 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL360182.1-201ENST00000397433 468 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL139397.2-201ENST00000404529 772 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 SNRPEP6-201ENST00000407465 277 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RPL7P10-201ENST00000417407 739 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 SNRPEP4-201ENST00000435815 279 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC005094.1-201ENST00000440420 368 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 H3F3BP1-201ENST00000440551 403 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC005008.1-201ENST00000456151 612 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC004801.2-202ENST00000463559 283 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-64P-201ENST00000517119 105 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC139365.2-201ENST00000517972 253 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AP001803.1-201ENST00000525668 147 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL133271.1-201ENST00000538229 291 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC006006.1-201ENST00000603082 144 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AP000654.2-201ENST00000605633 586 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL008729.2-201ENST00000606393 473 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC098657.3-201ENST00000620434 263 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 MIR6813-201ENST00000621638 56 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AL162377.2-201ENST00000624532 337 ntBASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.22□□□□□ -1.41
DEPDC4Q8N2C3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
DEPDC4Q8N2C3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
DEPDC4Q8N2C3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
DEPDC4Q8N2C3 AC011455.2-201ENST00000599320 3336 ntBASIC6.21□□□□□ -1.41
DEPDC4Q8N2C3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 ZNF734P-201ENST00000419494 1534 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RNVU1-3-201ENST00000364313 161 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 Y_RNA.482-201ENST00000384377 111 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL136100.1-201ENST00000407696 330 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-954P-201ENST00000411355 107 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 POLHP1-201ENST00000411806 470 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL451139.1-201ENST00000434718 346 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 PRPF38AP2-201ENST00000438179 851 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC020550.1-201ENST00000447385 163 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 PPIAP3-201ENST00000450588 505 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC005165.2-201ENST00000466070 380 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RPS20P21-201ENST00000466859 343 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RPS27AP1-201ENST00000475545 471 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RPS16P9-201ENST00000477220 427 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC112484.3-201ENST00000505910 329 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC079140.5-201ENST00000507882 310 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-256P-201ENST00000516747 97 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RNA5SP400-201ENST00000517155 111 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms