Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RNA5SP372-201ENST00000390836 115 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 TAF9BP1-201ENST00000396646 746 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 SDHCP2-201ENST00000398565 501 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AL161449.1-201ENST00000414531 1199 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RPL7P53-201ENST00000421245 739 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AL356387.2-201ENST00000422272 243 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 IPMKP1-201ENST00000425988 855 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 MTND1P32-201ENST00000433043 938 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ATP5F1P1-201ENST00000433775 569 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 MTCYBP11-201ENST00000447254 1109 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ISCUP1-201ENST00000454451 448 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RPL7AP28-201ENST00000464513 571 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 MTND6P6-201ENST00000478031 263 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RPL30P11-201ENST00000495304 339 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC109445.1-201ENST00000512356 383 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RN7SKP122-201ENST00000515923 296 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RNU6-202P-201ENST00000515998 96 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 SOD1P3-201ENST00000518682 454 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AP003461.1-201ENST00000528866 78 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 MTCYBP27-201ENST00000555160 670 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC079171.1-201ENST00000568788 914 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 KPNA2P3-201ENST00000584190 848 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC009220.3-201ENST00000604318 586 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AL139344.1-201ENST00000605228 195 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC090948.1-201ENST00000607464 549 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC007490.1-201ENST00000624321 703 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 MIR6830-201ENST00000636015 70 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC125257.1-201ENST00000560400 2930 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 RNU6-492P-201ENST00000363035 104 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 RNU1-83P-201ENST00000363426 164 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 SUGT1P1-201ENST00000379514 476 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 MIR195-201ENST00000385194 87 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 HDGFP1-201ENST00000405943 252 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AL139421.1-201ENST00000423010 169 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 SKP1P3-201ENST00000429280 487 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 NDUFA5P7-201ENST00000452914 242 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 HMGN3P1-201ENST00000453847 193 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 RPS15AP1-201ENST00000457423 391 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 NF1P3-201ENST00000457709 450 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC010307.1-201ENST00000467206 836 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC109327.1-201ENST00000471666 403 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 NIP7P2-201ENST00000485801 544 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 OR5H4P-201ENST00000510851 923 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC079395.1-201ENST00000510981 262 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 KRT19P6-201ENST00000510983 209 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AP000926.4-201ENST00000527351 454 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.18□□□□□ -1.74
BEST3Q8N1M1 DUXAP1-201ENST00000556632 463 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC090515.3-201ENST00000560431 315 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.18□□□□□ -1.74
BEST3Q8N1M1 AC023575.1-201ENST00000580510 358 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms