Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC106785.1-201ENST00000565935 262 ntBASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 AC009101.1-201ENST00000568135 242 ntBASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 BNIP3P31-201ENST00000604515 566 ntBASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 AL118496.1-201ENST00000440201 1812 ntBASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf40Q8IXQ3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AC090971.4-201ENST00000560291 1800 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RNU6-984P-201ENST00000363236 109 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RNA5SP97-201ENST00000365006 84 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AL355615.1-201ENST00000406187 641 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RPL31P52-201ENST00000407532 367 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RNA5SP306-201ENST00000411087 107 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RPL7P2-201ENST00000427639 268 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AC092170.1-201ENST00000440211 356 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RPS7P5-201ENST00000441482 581 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 YWHAQP9-201ENST00000445891 512 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 GTF2IP12-201ENST00000456547 356 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RPL21P11-201ENST00000461458 483 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RPL21P18-201ENST00000469899 480 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 RPS17P11-201ENST00000474297 293 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 MIR2114-201ENST00000516645 80 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 COX6B1P6-201ENST00000522347 255 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 BNIP3P5-201ENST00000562290 498 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AC006116.7-201ENST00000590141 756 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 PCNAP1-202ENST00000595299 752 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AP003117.1-201ENST00000602771 554 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AL138955.1-201ENST00000622881 1040 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 FP236240.3-201ENST00000623061 327 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 AC114546.3-201ENST00000623582 1734 ntBASIC3.61□□□□□ -1.83
C9orf40Q8IXQ3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RNA5SP322-201ENST00000363617 119 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 OR52E6-202ENST00000379946 954 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RNU6-207P-201ENST00000384137 107 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RNU2-6P-201ENST00000411404 190 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 Z74696.2-201ENST00000436514 498 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 HSFY3P-201ENST00000444242 1191 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC044797.1-201ENST00000445744 679 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RPS17P13-201ENST00000448974 407 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 MTND6P6-201ENST00000478031 263 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RN7SL323P-201ENST00000494712 295 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC104115.2-201ENST00000523026 687 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC010306.1-201ENST00000523223 1117 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 OR4A12P-201ENST00000530847 918 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms