Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB43Q86YS6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 RNU6-152P-201ENST00000384037 107 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 U8.11-201ENST00000384699 133 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 U8.12-201ENST00000384701 133 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 MIR199A2-201ENST00000385289 110 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC017083.1-201ENST00000428093 483 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 FTH1P6-201ENST00000430768 320 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 PDSS1P2-201ENST00000449397 678 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 RPL7P31-201ENST00000450192 724 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 U8.18-201ENST00000459285 133 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 RPL23AP14-201ENST00000468281 468 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AP000926.1-201ENST00000479573 241 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC006499.5-201ENST00000505037 514 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 FABP5P6-201ENST00000510588 409 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 RNU6-1004P-201ENST00000516584 111 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC022695.1-201ENST00000522089 237 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 OR8I1P-201ENST00000529291 931 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 MIR4512-201ENST00000583257 77 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 MIR5187-201ENST00000583479 76 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB43Q86YS6 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC012314.7-201ENST00000619693 93 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 AC009093.8-201ENST00000641769 292 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 OR5AC4P-202ENST00000642086 985 ntBASIC3.59□□□□□ -1.83
RAB43Q86YS6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAB43Q86YS6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RAB43Q86YS6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RAB43Q86YS6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.84
RAB43Q86YS6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 SNORA63.1-201ENST00000362493 131 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 RNA5SP119-201ENST00000362715 117 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 SNORA73.2-201ENST00000364946 201 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 MTND4P11-201ENST00000417020 1058 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 RPL6P5-201ENST00000445678 828 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 RPL7P49-201ENST00000471402 708 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC010683.1-201ENST00000473673 378 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 RN7SKP18-201ENST00000516005 275 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 ABI1P1-201ENST00000603375 1120 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC008121.2-201ENST00000614647 523 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AC024560.2-201ENST00000507981 1497 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
RAB43Q86YS6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 UBE3AP2-201ENST00000429033 2259 ntBASIC3.58□□□□□ -1.84
RAB43Q86YS6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RAB43Q86YS6 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
RAB43Q86YS6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
RAB43Q86YS6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.57□□□□□ -1.84
RAB43Q86YS6 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
RAB43Q86YS6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAB43Q86YS6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAB43Q86YS6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAB43Q86YS6 AC009237.5-201ENST00000414271 501 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms