Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC019070.1-201ENST00000415008 1024 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL009174.1-201ENST00000426577 416 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC087650.1-201ENST00000431445 468 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC010881.1-201ENST00000433830 235 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AF228730.2-201ENST00000438784 848 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL356535.1-201ENST00000440335 398 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL158053.1-201ENST00000441503 453 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 VN1R25P-201ENST00000443385 738 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL590399.6-201ENST00000446396 307 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 VN1R40P-201ENST00000455196 941 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 RPS20P32-201ENST00000456044 356 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 RPS15AP1-201ENST00000457423 391 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AP000873.1-201ENST00000463987 400 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 RPS23P7-201ENST00000466210 444 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AP000893.1-201ENST00000474462 794 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 CEACAMP10-202ENST00000495431 496 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC018797.3-201ENST00000513388 1241 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC099522.1-202ENST00000514718 367 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 CYCSP29-201ENST00000533731 318 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL139286.1-201ENST00000604465 483 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 RPL21P136-201ENST00000605378 396 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AP005229.2-201ENST00000609980 697 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC006338.2-201ENST00000616864 791 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL445567.2-201ENST00000618935 498 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL359715.5-201ENST00000623431 443 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC068620.4-201ENST00000636730 1182 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL590396.4-201ENST00000636779 956 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 ELL2P4-201ENST00000446870 1376 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 MTCO1P24-201ENST00000515438 1558 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL122126.1-201ENST00000546905 1318 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RNA5SP502-201ENST00000362694 119 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RNA5SP443-201ENST00000363083 132 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RNA5SP167-201ENST00000365461 116 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 SNORA62-201ENST00000365493 153 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RNU6-444P-201ENST00000383988 108 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 COX6CP17-201ENST00000421389 185 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 HMGB1P16-201ENST00000447155 540 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC010618.1-201ENST00000469924 477 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 FTH1P9-201ENST00000513251 355 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RNU6-416P-201ENST00000516265 103 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 MRPL49P2-201ENST00000521066 465 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC004217.3-201ENST00000551552 878 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 GNRHR2P1-201ENST00000555315 631 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 RPL23AP87-202ENST00000573039 466 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC022069.1-201ENST00000582910 658 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AP002906.1-201ENST00000603405 233 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC007566.2-201ENST00000603642 413 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AP003392.5-201ENST00000607857 415 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AP000255.1-201ENST00000610276 676 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AL713922.2-201ENST00000619384 716 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 MIR8059-201ENST00000620427 81 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 MIR6830-201ENST00000636015 70 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 AC138649.5-201ENST00000637456 137 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 LINC02471-203ENST00000641941 4752 ntBASIC3.69□□□□□ -1.82
NIPAL3Q6P499 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NIPAL3Q6P499 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms