Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC012409.4-201ENST00000612923 249 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 AC005224.3-201ENST00000584683 2140 ntBASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PRPF38BQ5VTL8 THAP12P4-201ENST00000528321 2266 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 ZNF807-201ENST00000328088 1707 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC130650.2-201ENST00000618736 2403 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 HSPA8P11-201ENST00000508840 1898 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AL442639.1-201ENST00000625030 1899 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 Y_RNA.482-201ENST00000384377 111 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RNU6-601P-201ENST00000384540 107 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AL360271.1-201ENST00000395679 510 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC013442.1-201ENST00000397347 228 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RNU2-22P-201ENST00000411266 212 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 HMGN1P24-201ENST00000412282 298 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 MCFD2P1-201ENST00000417812 300 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RPS17P17-201ENST00000419392 409 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 MTND2P29-201ENST00000438595 412 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RAC1P7-201ENST00000445367 377 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 TPT1P12-201ENST00000448968 492 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 U8.20-201ENST00000459445 131 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC058823.1-201ENST00000485315 474 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC016559.2-201ENST00000510759 359 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC104136.1-201ENST00000512969 394 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 SNORA25.10-201ENST00000515926 124 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RNU6-256P-201ENST00000516747 97 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC078899.1-201ENST00000521432 1185 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AP005597.2-201ENST00000526238 341 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 OR1F2P-201ENST00000570470 933 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RN7SL475P-201ENST00000583379 298 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AC008782.1-201ENST00000603386 430 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 AL596245.1-201ENST00000618994 362 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 uc_338.11-201ENST00000619132 160 ntBASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PRPF38BQ5VTL8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PRPF38BQ5VTL8 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRPF38BQ5VTL8 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms