Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNA5SP108-201ENST00000605921 117 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 VIS1.1-201ENST00000610517 203 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC103706.2-201ENST00000638080 240 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 MFSD8-245ENST00000641743 948 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 MTND5P28-201ENST00000438005 1594 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC025031.4-201ENST00000621248 3271 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 Z98755.1-201ENST00000407015 1384 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL590762.2-201ENST00000395798 571 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 MTCO3P31-201ENST00000405526 789 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL133264.1-201ENST00000407157 562 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 USP9YP26-201ENST00000421008 661 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC092832.1-201ENST00000422934 400 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC012519.1-201ENST00000424588 610 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC007559.1-201ENST00000428736 355 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 MTCO1P3-201ENST00000429327 192 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 HMGB1P16-201ENST00000447155 540 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 C1GALT1P3-201ENST00000522049 819 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 NBEAP1-201ENST00000554452 979 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC008015.1-201ENST00000555505 465 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC074051.3-201ENST00000570238 358 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC015912.2-201ENST00000571053 181 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC005255.1-201ENST00000593748 216 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC110760.3-201ENST00000598794 467 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC068790.7-201ENST00000602347 528 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL512782.1-201ENST00000603093 364 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC103792.1-201ENST00000603591 919 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AC121247.2-201ENST00000604776 136 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL603755.1-201ENST00000619504 163 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 AL359757.1-201ENST00000623176 255 ntBASIC5.34□□□□□ -1.55
LONRF3Q496Y0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.34□□□□□ -1.55
LONRF3Q496Y0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LONRF3Q496Y0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.56
LONRF3Q496Y0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RNU6-582P-201ENST00000362989 107 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RNU6-839P-201ENST00000363347 108 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RNU6-115P-201ENST00000364310 107 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 Y_RNA.465-201ENST00000384293 102 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AL139098.1-201ENST00000407291 389 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 MORF4L1P6-201ENST00000418771 268 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RPL7P53-201ENST00000421245 739 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 DPRXP1-201ENST00000426312 460 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 UBE2D3P1-201ENST00000436669 444 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC104651.2-201ENST00000447549 528 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RPL29P29-201ENST00000448725 423 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 SLC25A18P1-201ENST00000449385 454 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AURKAPS2-201ENST00000454983 333 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC146507.1-201ENST00000468335 354 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC011979.1-201ENST00000472300 483 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC091868.1-201ENST00000508746 304 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 PTGES3P3-201ENST00000511479 482 ntBASIC5.33□□□□□ -1.56
LONRF3Q496Y0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.33□□□□□ -1.56
LONRF3Q496Y0 RNA5SP135-201ENST00000517019 125 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms