Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AL162713.1-201ENST00000604480 262 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 HMGB1P50-201ENST00000605814 607 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 AL713922.2-201ENST00000619384 716 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 AL158062.1-201ENST00000619632 745 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA1SQ13698 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.12□□□□□ -1.75
CACNA1SQ13698 MTND4P26-201ENST00000415971 1359 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.12□□□□□ -1.75
CACNA1SQ13698 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA1SQ13698 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA1SQ13698 SNORA54-201ENST00000384281 123 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 AL031679.1-201ENST00000400616 525 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 RNA5SP80-201ENST00000410475 111 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 RN7SL429P-201ENST00000479090 223 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 RN7SL489P-201ENST00000486185 223 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 RN7SL327P-201ENST00000488659 223 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.12□□□□□ -1.75
CACNA1SQ13698 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.12□□□□□ -1.75
CACNA1SQ13698 AC233280.2-201ENST00000603917 1070 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.12□□□□□ -1.75
CACNA1SQ13698 RN7SL853P-201ENST00000617250 223 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 FAM35DP-201ENST00000323387 2712 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA1SQ13698 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA1SQ13698 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CACNA1SQ13698 AC005332.5-201ENST00000591222 2919 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 AC068647.1-201ENST00000489539 2265 ntBASIC4.12□□□□□ -1.75
CACNA1SQ13698 AC006504.1-201ENST00000562493 3666 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 RNA5SP432-201ENST00000362480 116 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC006989.1-201ENST00000427212 131 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 SKP1P1-201ENST00000438081 489 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 HMGB3P14-201ENST00000494195 599 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC026333.2-201ENST00000542164 106 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC018692.3-201ENST00000623929 123 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC093010.3-201ENST00000570269 15214 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 RNU1-89P-201ENST00000384592 164 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 SNORD67-201ENST00000390833 111 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AL353678.1-201ENST00000422735 741 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 RPL35AP12-201ENST00000425362 338 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 RPS29P26-201ENST00000477483 171 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC068724.1-201ENST00000487100 792 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC027309.2-201ENST00000520566 192 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC099489.2-201ENST00000574976 260 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.11□□□□□ -1.75
CACNA1SQ13698 AC092111.2-201ENST00000611627 1414 ntBASIC4.11□□□□□ -1.75
CACNA1SQ13698 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CACNA1SQ13698 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CACNA1SQ13698 NMD3P1-201ENST00000439704 1488 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CACNA1SQ13698 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 SNORA5B-201ENST00000363786 132 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 AC105272.1-201ENST00000438604 198 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 AP000926.4-201ENST00000527351 454 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 AC113192.3-201ENST00000529152 742 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CACNA1SQ13698 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CACNA1SQ13698 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CACNA1SQ13698 MTND5P23-201ENST00000430812 1655 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CACNA1SQ13698 AC004944.1-201ENST00000517807 3059 ntBASIC4.1□□□□□ -1.75
CACNA1SQ13698 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 AC000123.3-201ENST00000624029 4975 ntBASIC4.09□□□□□ -1.75
CACNA1SQ13698 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 RNU6-301P-201ENST00000384277 107 ntBASIC4.09□□□□□ -1.75
CACNA1SQ13698 SNORA48.8-201ENST00000391324 134 ntBASIC4.09□□□□□ -1.75
CACNA1SQ13698 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.09□□□□□ -1.75
CACNA1SQ13698 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 AC100793.4-201ENST00000613683 429 ntBASIC4.09□□□□□ -1.75
CACNA1SQ13698 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CACNA1SQ13698 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.09□□□□□ -1.75
CACNA1SQ13698 AC026523.2-201ENST00000625039 7739 ntBASIC4.09□□□□□ -1.75
CACNA1SQ13698 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms