Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 MIR16-2-201ENST00000362117 81 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.05□□□□□ -1.6
CALD1Q05682 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.05□□□□□ -1.6
CALD1Q05682 AL158050.1-201ENST00000416077 457 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 AC087650.1-201ENST00000431445 468 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.05□□□□□ -1.6
CALD1Q05682 RPS17P13-201ENST00000448974 407 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 SNRPGP5-201ENST00000456003 220 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AC011037.1-201ENST00000483964 558 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 RN7SL323P-201ENST00000494712 295 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.05□□□□□ -1.6
CALD1Q05682 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.05□□□□□ -1.6
CALD1Q05682 AC108043.1-201ENST00000512696 574 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AC026726.1-201ENST00000512859 601 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 AC104229.1-201ENST00000561364 255 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.05□□□□□ -1.6
CALD1Q05682 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.05□□□□□ -1.6
CALD1Q05682 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.05□□□□□ -1.6
CALD1Q05682 AC006213.5-201ENST00000619673 288 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.05□□□□□ -1.6
CALD1Q05682 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.05□□□□□ -1.6
CALD1Q05682 ATE1-AS1-202ENST00000636460 506 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 U6.107-201ENST00000637108 79 ntBASIC5.05□□□□□ -1.6
CALD1Q05682 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.05□□□□□ -1.6
CALD1Q05682 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CALD1Q05682 U1.1-201ENST00000384101 164 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AL445189.1-201ENST00000405722 338 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 MTATP6P31-201ENST00000406985 692 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.04□□□□□ -1.6
CALD1Q05682 UBE2V1P11-201ENST00000411559 285 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AL445183.3-201ENST00000414168 502 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CALD1Q05682 AC092647.1-201ENST00000420654 287 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AC073069.1-201ENST00000428657 441 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.04□□□□□ -1.6
CALD1Q05682 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CALD1Q05682 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CALD1Q05682 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.04□□□□□ -1.6
CALD1Q05682 MTND6P6-201ENST00000478031 263 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AP000926.1-201ENST00000479573 241 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.04□□□□□ -1.6
CALD1Q05682 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.04□□□□□ -1.6
CALD1Q05682 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.04□□□□□ -1.6
CALD1Q05682 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.04□□□□□ -1.6
CALD1Q05682 AC106785.3-201ENST00000564064 847 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AC007423.1-201ENST00000605009 627 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 AC123768.4-201ENST00000616244 701 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 RMST_10.1-201ENST00000616309 154 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 U7.8-201ENST00000619968 63 ntBASIC5.04□□□□□ -1.6
CALD1Q05682 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.04□□□□□ -1.6
CALD1Q05682 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CALD1Q05682 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 HSPA8P19-201ENST00000505359 1517 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.03□□□□□ -1.6
CALD1Q05682 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CALD1Q05682 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CALD1Q05682 RN7SKP56-201ENST00000410513 331 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 AC009237.5-201ENST00000414271 501 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 AL138785.1-201ENST00000425821 331 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 AL365396.1-201ENST00000430854 671 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 RPS20P21-201ENST00000466859 343 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 NPM1P41-201ENST00000512920 831 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 HMGB1P23-201ENST00000518743 568 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 MIR5685-201ENST00000579080 79 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 MIR4716-201ENST00000579628 84 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 PCNAP1-202ENST00000595299 752 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 MIR8084-201ENST00000614105 89 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.03□□□□□ -1.6
CALD1Q05682 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.03□□□□□ -1.6
CALD1Q05682 MTCO1P18-201ENST00000455518 1419 ntBASIC5.03□□□□□ -1.6
CALD1Q05682 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.03□□□□□ -1.6
CALD1Q05682 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CALD1Q05682 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CALD1Q05682 TNPO1P3-201ENST00000436471 2662 ntBASIC5.02□□□□□ -1.61
CALD1Q05682 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CALD1Q05682 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.02□□□□□ -1.61
CALD1Q05682 BDP1P-201ENST00000582658 1990 ntBASIC5.02□□□□□ -1.61
CALD1Q05682 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CALD1Q05682 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CALD1Q05682 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.02□□□□□ -1.61
CALD1Q05682 RNU1-87P-201ENST00000363727 170 ntBASIC5.02□□□□□ -1.61
CALD1Q05682 SNORA40.4-201ENST00000390971 128 ntBASIC5.02□□□□□ -1.61
CALD1Q05682 AC234782.4-201ENST00000417646 1048 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms