Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC069209.1-201ENST00000619282 651 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 AC012442.3-202ENST00000636742 206 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.23□□□□□ -1.89
H3F3AP84243 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.23□□□□□ -1.89
H3F3AP84243 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3AP84243 AC096656.1-201ENST00000623826 1364 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 ZNF285B-201ENST00000561698 1767 ntBASIC3.23□□□□□ -1.89
H3F3AP84243 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.22□□□□□ -1.89
H3F3AP84243 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
H3F3AP84243 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 SNORD9-201ENST00000362566 104 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 RNU6-283P-201ENST00000364788 107 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AL391417.1-201ENST00000404100 426 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 U3.39-201ENST00000408569 239 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3AP84243 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.22□□□□□ -1.89
H3F3AP84243 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 AC013404.1-201ENST00000413068 249 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 CYCSP4-201ENST00000429682 331 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.22□□□□□ -1.89
H3F3AP84243 MTCYBP29-201ENST00000436327 1006 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 CCRL1P1-201ENST00000449542 1053 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 RPS20P32-201ENST00000456044 356 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 NPM1P17-201ENST00000479221 602 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.22□□□□□ -1.89
H3F3AP84243 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 TRAV31-201ENST00000502780 342 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.22□□□□□ -1.89
H3F3AP84243 SAP18P1-201ENST00000512058 390 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.22□□□□□ -1.89
H3F3AP84243 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 AL389895.1-201ENST00000554127 252 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 OR4U1P-201ENST00000554958 912 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC034105.4-201ENST00000568304 277 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3AP84243 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3AP84243 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3AP84243 AP003117.1-201ENST00000602771 554 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC006077.1-201ENST00000604746 343 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC243654.2-201ENST00000612843 443 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 AC119674.1-207ENST00000641355 633 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 SPATA2P1-201ENST00000431223 2055 ntBASIC3.22□□□□□ -1.89
H3F3AP84243 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3AP84243 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3AP84243 SEPT7P7-201ENST00000420492 1301 ntBASIC3.21□□□□□ -1.89
H3F3AP84243 MFSD8-236ENST00000641509 4050 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC007656.2-201ENST00000624902 4547 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 SNORD6-201ENST00000365444 73 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 SNORA5A-201ENST00000384111 134 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 MIR554-201ENST00000384874 96 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.21□□□□□ -1.9
H3F3AP84243 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.21□□□□□ -1.9
H3F3AP84243 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3AP84243 CDC27P1-201ENST00000445384 715 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 HMGB3P30-201ENST00000457863 606 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC005726.1-201ENST00000494679 427 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3AP84243 RN7SKP18-201ENST00000516005 275 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 RNU4-18P-201ENST00000516751 149 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3AP84243 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 AC007687.1-201ENST00000602704 304 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AP003117.2-201ENST00000606010 545 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC008121.2-201ENST00000614647 523 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AL133370.2-201ENST00000619934 439 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
H3F3AP84243 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AL356863.1-201ENST00000623378 1080 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 AC034229.5-201ENST00000624258 185 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3AP84243 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
H3F3AP84243 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms