Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.18□□□□□ -2.06
RPL39P62891 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
RPL39P62891 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPL39P62891 ZNF285B-201ENST00000561698 1767 ntBASIC2.18□□□□□ -2.06
RPL39P62891 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
RPL39P62891 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 SNORA62.2-201ENST00000364672 152 ntBASIC2.17□□□□□ -2.06
RPL39P62891 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 RNU6-1279P-201ENST00000383917 103 ntBASIC2.17□□□□□ -2.06
RPL39P62891 HMGN1P24-201ENST00000412282 298 ntBASIC2.17□□□□□ -2.06
RPL39P62891 HSFY4P-201ENST00000415994 1181 ntBASIC2.17□□□□□ -2.06
RPL39P62891 AC013470.3-201ENST00000420252 1194 ntBASIC2.17□□□□□ -2.06
RPL39P62891 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL39P62891 AC093151.1-201ENST00000427711 313 ntBASIC2.17□□□□□ -2.06
RPL39P62891 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL39P62891 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL39P62891 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.17□□□□□ -2.06
RPL39P62891 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL39P62891 S100A11P1-201ENST00000477525 312 ntBASIC2.17□□□□□ -2.06
RPL39P62891 ACTR3P3-201ENST00000480448 893 ntBASIC2.17□□□□□ -2.06
RPL39P62891 AC108860.1-201ENST00000484521 383 ntBASIC2.17□□□□□ -2.06
RPL39P62891 RN7SL20P-201ENST00000488827 297 ntBASIC2.17□□□□□ -2.06
RPL39P62891 RPL7P23-201ENST00000493874 747 ntBASIC2.17□□□□□ -2.06
RPL39P62891 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL39P62891 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 AC018552.3-201ENST00000567416 561 ntBASIC2.17□□□□□ -2.06
RPL39P62891 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.17□□□□□ -2.06
RPL39P62891 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.17□□□□□ -2.06
RPL39P62891 AC243312.2-201ENST00000623340 601 ntBASIC2.17□□□□□ -2.06
RPL39P62891 AC009093.8-201ENST00000641769 292 ntBASIC2.17□□□□□ -2.06
RPL39P62891 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.17□□□□□ -2.06
RPL39P62891 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL39P62891 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
RPL39P62891 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 AC093775.1-201ENST00000624154 1868 ntBASIC2.16□□□□□ -2.06
RPL39P62891 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
RPL39P62891 AC068538.1-201ENST00000376856 336 ntBASIC2.16□□□□□ -2.06
RPL39P62891 SNORA56-201ENST00000383966 129 ntBASIC2.16□□□□□ -2.06
RPL39P62891 SNORA5A-201ENST00000384111 134 ntBASIC2.16□□□□□ -2.06
RPL39P62891 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 RPL31P1-201ENST00000398116 372 ntBASIC2.16□□□□□ -2.06
RPL39P62891 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL39P62891 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL39P62891 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL39P62891 AC063979.1-201ENST00000415539 377 ntBASIC2.16□□□□□ -2.06
RPL39P62891 AL807761.1-201ENST00000417622 171 ntBASIC2.16□□□□□ -2.06
RPL39P62891 RSL24D1P6-201ENST00000426934 401 ntBASIC2.16□□□□□ -2.06
RPL39P62891 AC122718.1-201ENST00000439448 744 ntBASIC2.16□□□□□ -2.06
RPL39P62891 RPL21P23-201ENST00000446654 460 ntBASIC2.16□□□□□ -2.06
RPL39P62891 RPL21P13-201ENST00000488305 481 ntBASIC2.16□□□□□ -2.06
RPL39P62891 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL39P62891 RNU1-95P-201ENST00000516357 160 ntBASIC2.16□□□□□ -2.06
RPL39P62891 RNU1-128P-201ENST00000516704 160 ntBASIC2.16□□□□□ -2.06
RPL39P62891 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.16□□□□□ -2.06
RPL39P62891 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL39P62891 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 OR5D17P-201ENST00000531492 978 ntBASIC2.16□□□□□ -2.06
RPL39P62891 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC2.16□□□□□ -2.06
RPL39P62891 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.16□□□□□ -2.06
RPL39P62891 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.16□□□□□ -2.06
RPL39P62891 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL39P62891 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL39P62891 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.16□□□□□ -2.06
RPL39P62891 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 AC006116.7-201ENST00000590141 756 ntBASIC2.16□□□□□ -2.06
RPL39P62891 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL39P62891 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL39P62891 AL451086.1-201ENST00000605596 223 ntBASIC2.16□□□□□ -2.06
RPL39P62891 AC073657.2-201ENST00000605661 303 ntBASIC2.16□□□□□ -2.06
RPL39P62891 AL121772.2-201ENST00000614331 297 ntBASIC2.16□□□□□ -2.06
RPL39P62891 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL39P62891 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL39P62891 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPL39P62891 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
RPL39P62891 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.15□□□□□ -2.07
RPL39P62891 OR1S2-201ENST00000302592 978 ntBASIC2.15□□□□□ -2.07
RPL39P62891 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPL39P62891 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPL39P62891 MIR181B1-201ENST00000385240 110 ntBASIC2.15□□□□□ -2.07
RPL39P62891 RNA5SP344-201ENST00000411081 104 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms