Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL022393.1-201ENST00000625142 1677 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AL121657.1-201ENST00000327215 531 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 MIR506-201ENST00000384998 124 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 EIF5P1-201ENST00000400019 1231 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AL355379.1-201ENST00000405542 640 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDL3P58872 MIR1193-201ENST00000408109 78 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 SNORA11F-201ENST00000408237 128 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.29□□□□□ -1.56
RHBDL3P58872 MTCYBP24-201ENST00000420387 1106 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AL513175.2-201ENST00000422071 443 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 HSFY1P1-201ENST00000423928 1178 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 SDCBPP2-201ENST00000424643 885 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 RPL23AP52-201ENST00000439311 478 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDL3P58872 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 RPS27AP17-201ENST00000463344 455 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 UQCRHP4-201ENST00000471686 272 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AC105137.1-201ENST00000484355 562 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 RN7SL691P-201ENST00000494487 301 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 HIGD1AP3-201ENST00000515857 278 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 RNU4-60P-201ENST00000517239 135 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 MRPL49P2-201ENST00000521066 465 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDL3P58872 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDL3P58872 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDL3P58872 AC067959.1-201ENST00000604334 379 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AL159169.3-201ENST00000608871 561 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 AC023158.2-201ENST00000614876 543 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDL3P58872 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDL3P58872 AL731532.2-201ENST00000623542 1953 ntBASIC5.29□□□□□ -1.56
RHBDL3P58872 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDL3P58872 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 Y_RNA.25-201ENST00000362528 102 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 RNA5SP28-201ENST00000363841 119 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 RN7SKP227-201ENST00000364445 330 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 SNORA70C-201ENST00000384538 135 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AL583835.1-201ENST00000399570 407 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 RPL23AP47-201ENST00000408017 460 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 NRBF2P2-201ENST00000413087 861 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDL3P58872 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 MTND2P5-201ENST00000432656 1006 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC114495.1-201ENST00000441274 436 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 VN1R25P-201ENST00000443385 738 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AL009048.1-201ENST00000450437 298 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 RPL5P24-201ENST00000463742 885 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 RPL7P19-201ENST00000469948 618 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDL3P58872 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC013828.1-201ENST00000481845 158 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC134050.1-201ENST00000495088 933 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 TMEM248P1-201ENST00000510579 951 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 RNA5SP446-201ENST00000515955 82 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 RNU6-1261P-201ENST00000517194 104 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDL3P58872 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC007224.1-201ENST00000564410 144 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AL355812.1-201ENST00000603215 216 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC091979.2-201ENST00000607514 214 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC092653.1-201ENST00000608509 531 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AL050303.3-201ENST00000613704 284 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC067931.1-201ENST00000624190 671 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDL3P58872 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RHBDL3P58872 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDL3P58872 AC005005.4-201ENST00000623789 16698 ntBASIC5.28□□□□□ -1.56
RHBDL3P58872 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RHBDL3P58872 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDL3P58872 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms