Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ARF4P3-201ENST00000397387 509 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 CIR1P3-201ENST00000405137 479 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AL133384.1-201ENST00000412744 351 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 TPMTP2-201ENST00000414372 726 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 RAD23BP1-201ENST00000421404 1227 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC009480.2-201ENST00000422916 432 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 CYCSP6-201ENST00000434498 302 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 CLUHP1-201ENST00000435012 1190 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 RABEPKP1-201ENST00000440529 1026 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 CNOT7P2-201ENST00000441051 832 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 AL671855.1-201ENST00000446875 1203 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC144530.1-201ENST00000452862 555 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC013267.1-201ENST00000458227 267 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC012170.1-201ENST00000495139 359 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 FCF1P3-201ENST00000496394 590 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC112204.1-201ENST00000502591 103 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC108078.1-201ENST00000508073 725 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC018797.3-201ENST00000513388 1241 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC034159.1-201ENST00000513885 583 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.74□□□□□ -1.65
CLRN1P58418 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC118273.2-201ENST00000532092 465 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AL592295.2-201ENST00000612578 206 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC009237.17-201ENST00000618111 748 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 AC068880.5-201ENST00000624331 290 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 AC110994.2-201ENST00000635481 492 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 MIR6863-201ENST00000636112 90 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 MIR3688-2-201ENST00000636963 87 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 AC093849.1-201ENST00000563631 2209 ntBASIC4.74□□□□□ -1.65
CLRN1P58418 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CLRN1P58418 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 AL450345.1-202ENST00000605741 3881 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLRN1P58418 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.73□□□□□ -1.65
CLRN1P58418 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CLRN1P58418 RNU6-249P-201ENST00000363016 102 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RNA5SP335-201ENST00000363817 110 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RN7SKP15-201ENST00000364742 309 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RNY4P34-201ENST00000364779 95 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 Y_RNA.372-201ENST00000365599 102 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RNU1-77P-201ENST00000390868 162 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 GSTA9P-201ENST00000406231 611 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AL590002.1-201ENST00000406554 418 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 CCNG1P1-201ENST00000406783 885 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 USP9YP6-201ENST00000413550 854 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 BX295541.1-201ENST00000417774 250 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 AC000111.3-201ENST00000433478 193 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 RSU1P2-202ENST00000437884 485 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AL662791.1-201ENST00000441992 928 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 USP9YP34-201ENST00000453983 808 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 SETP20-201ENST00000457046 852 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 AC079168.1-201ENST00000458741 345 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.73□□□□□ -1.65
CLRN1P58418 RPL31P50-201ENST00000471002 296 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RN7SL273P-201ENST00000481561 299 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 RN7SL547P-201ENST00000490793 290 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AC104109.1-201ENST00000498563 436 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms