Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HMGN2P7-201ENST00000456186 273 ntBASIC3.84□□□□□ -1.79
CDH6P55285 NPM1P41-201ENST00000512920 831 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH6P55285 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH6P55285 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH6P55285 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH6P55285 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH6P55285 TRAV15-201ENST00000556680 249 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH6P55285 HSPE1P5-201ENST00000561489 272 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC069304.3-201ENST00000603938 1084 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AP003117.2-201ENST00000606010 545 ntBASIC3.84□□□□□ -1.79
CDH6P55285 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH6P55285 AC245389.2-201ENST00000616023 576 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC243756.2-201ENST00000618406 463 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC242843.1-201ENST00000618702 573 ntBASIC3.84□□□□□ -1.79
CDH6P55285 AC244205.2-202ENST00000635781 342 ntBASIC3.84□□□□□ -1.79
CDH6P55285 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH6P55285 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH6P55285 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH6P55285 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
CDH6P55285 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH6P55285 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH6P55285 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.84□□□□□ -1.8
CDH6P55285 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 AC022031.1-201ENST00000585985 2593 ntBASIC3.83□□□□□ -1.8
CDH6P55285 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH6P55285 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH6P55285 RNA5SP479-201ENST00000364858 117 ntBASIC3.83□□□□□ -1.8
CDH6P55285 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.83□□□□□ -1.8
CDH6P55285 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CDH6P55285 RPL32P23-201ENST00000397237 405 ntBASIC3.83□□□□□ -1.8
CDH6P55285 CCNB2P1-201ENST00000399411 1150 ntBASIC3.83□□□□□ -1.8
CDH6P55285 RN7SKP156-201ENST00000410308 342 ntBASIC3.83□□□□□ -1.8
CDH6P55285 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH6P55285 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
CDH6P55285 AC017083.1-201ENST00000428093 483 ntBASIC3.83□□□□□ -1.8
CDH6P55285 MTND2P21-201ENST00000436242 1042 ntBASIC3.83□□□□□ -1.8
CDH6P55285 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 TPTE2P6-202ENST00000445572 1007 ntBASIC3.83□□□□□ -1.8
CDH6P55285 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH6P55285 AC022034.3-201ENST00000471393 478 ntBASIC3.83□□□□□ -1.8
CDH6P55285 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH6P55285 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH6P55285 AC022784.5-201ENST00000522241 437 ntBASIC3.83□□□□□ -1.8
CDH6P55285 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH6P55285 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH6P55285 MIR5187-201ENST00000583479 76 ntBASIC3.83□□□□□ -1.8
CDH6P55285 AC016911.1-201ENST00000613297 452 ntBASIC3.83□□□□□ -1.8
CDH6P55285 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH6P55285 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH6P55285 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH6P55285 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDH6P55285 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH6P55285 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 AL049737.1-201ENST00000413920 1403 ntBASIC3.82□□□□□ -1.8
CDH6P55285 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
CDH6P55285 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
CDH6P55285 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 ELOCP6-201ENST00000429066 328 ntBASIC3.82□□□□□ -1.8
CDH6P55285 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH6P55285 AL645931.1-201ENST00000439737 410 ntBASIC3.82□□□□□ -1.8
CDH6P55285 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH6P55285 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH6P55285 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH6P55285 MTCO3P16-201ENST00000454456 754 ntBASIC3.82□□□□□ -1.8
CDH6P55285 ELOCP12-201ENST00000458706 328 ntBASIC3.82□□□□□ -1.8
CDH6P55285 AL133162.1-201ENST00000463228 453 ntBASIC3.82□□□□□ -1.8
CDH6P55285 MTCO1P31-201ENST00000506355 492 ntBASIC3.82□□□□□ -1.8
CDH6P55285 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
CDH6P55285 AC008489.1-201ENST00000524271 483 ntBASIC3.82□□□□□ -1.8
CDH6P55285 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH6P55285 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH6P55285 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH6P55285 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH6P55285 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH6P55285 AC107982.3-201ENST00000584957 985 ntBASIC3.82□□□□□ -1.8
CDH6P55285 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 AC103710.3-201ENST00000608157 948 ntBASIC3.82□□□□□ -1.8
CDH6P55285 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH6P55285 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CDH6P55285 AP000553.6-201ENST00000641242 118 ntBASIC3.82□□□□□ -1.8
CDH6P55285 USP8P1-201ENST00000494673 3183 ntBASIC3.82□□□□□ -1.8
CDH6P55285 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH6P55285 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms