Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPL6P9-201ENST00000466502 859 ntBASIC4.28□□□□□ -1.72
VCPP55072 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 RPL23AP94-201ENST00000512518 302 ntBASIC4.28□□□□□ -1.72
VCPP55072 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.28□□□□□ -1.72
VCPP55072 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.28□□□□□ -1.72
VCPP55072 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.28□□□□□ -1.72
VCPP55072 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 AC079171.1-201ENST00000568788 914 ntBASIC4.28□□□□□ -1.72
VCPP55072 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.28□□□□□ -1.72
VCPP55072 AC015849.2-201ENST00000605738 409 ntBASIC4.28□□□□□ -1.72
VCPP55072 AL450270.1-201ENST00000606160 391 ntBASIC4.28□□□□□ -1.72
VCPP55072 MIR7151-201ENST00000617477 60 ntBASIC4.28□□□□□ -1.72
VCPP55072 AL645927.2-201ENST00000618350 349 ntBASIC4.28□□□□□ -1.72
VCPP55072 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VCPP55072 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 SAGE2P-201ENST00000420011 2126 ntBASIC4.28□□□□□ -1.72
VCPP55072 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.28□□□□□ -1.72
VCPP55072 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VCPP55072 AC008725.1-201ENST00000605123 2263 ntBASIC4.28□□□□□ -1.72
VCPP55072 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
VCPP55072 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
VCPP55072 ERCC6-202ENST00000374127 1782 ntBASIC4.27□□□□□ -1.73
VCPP55072 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
VCPP55072 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
VCPP55072 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 AC095050.2-201ENST00000510748 1458 ntBASIC4.27□□□□□ -1.73
VCPP55072 OR4A15-201ENST00000314706 1035 ntBASIC4.27□□□□□ -1.73
VCPP55072 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 RNU6-213P-201ENST00000384051 104 ntBASIC4.27□□□□□ -1.73
VCPP55072 U8.11-201ENST00000384699 133 ntBASIC4.27□□□□□ -1.73
VCPP55072 U8.12-201ENST00000384701 133 ntBASIC4.27□□□□□ -1.73
VCPP55072 RPL7P53-201ENST00000421245 739 ntBASIC4.27□□□□□ -1.73
VCPP55072 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
VCPP55072 AP000907.1-201ENST00000428428 510 ntBASIC4.27□□□□□ -1.73
VCPP55072 AC007000.2-201ENST00000442564 487 ntBASIC4.27□□□□□ -1.73
VCPP55072 AC006011.1-201ENST00000442758 349 ntBASIC4.27□□□□□ -1.73
VCPP55072 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.27□□□□□ -1.73
VCPP55072 U8.18-201ENST00000459285 133 ntBASIC4.27□□□□□ -1.73
VCPP55072 AC018635.1-201ENST00000468292 1030 ntBASIC4.27□□□□□ -1.73
VCPP55072 SYT14P1-201ENST00000481459 721 ntBASIC4.27□□□□□ -1.73
VCPP55072 RPL30P11-201ENST00000495304 339 ntBASIC4.27□□□□□ -1.73
VCPP55072 AC092045.1-201ENST00000495716 1231 ntBASIC4.27□□□□□ -1.73
VCPP55072 OR5H4P-201ENST00000510851 923 ntBASIC4.27□□□□□ -1.73
VCPP55072 KRT19P6-201ENST00000510983 209 ntBASIC4.27□□□□□ -1.73
VCPP55072 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.27□□□□□ -1.73
VCPP55072 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.27□□□□□ -1.73
VCPP55072 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.27□□□□□ -1.73
VCPP55072 GTF2IP22-201ENST00000554443 182 ntBASIC4.27□□□□□ -1.73
VCPP55072 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.27□□□□□ -1.73
VCPP55072 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.27□□□□□ -1.73
VCPP55072 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.27□□□□□ -1.73
VCPP55072 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.27□□□□□ -1.73
VCPP55072 AC115085.1-201ENST00000588924 229 ntBASIC4.27□□□□□ -1.73
VCPP55072 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
VCPP55072 AC010680.4-201ENST00000605334 543 ntBASIC4.27□□□□□ -1.73
VCPP55072 AC005972.3-201ENST00000606304 481 ntBASIC4.27□□□□□ -1.73
VCPP55072 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.27□□□□□ -1.73
VCPP55072 SCARNA15.3-201ENST00000626315 122 ntBASIC4.27□□□□□ -1.73
VCPP55072 SCARNA4.1-201ENST00000628597 123 ntBASIC4.27□□□□□ -1.73
VCPP55072 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.27□□□□□ -1.73
VCPP55072 LINC00561-201ENST00000565815 2738 ntBASIC4.27□□□□□ -1.73
VCPP55072 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.27□□□□□ -1.73
VCPP55072 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.27□□□□□ -1.73
VCPP55072 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VCPP55072 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VCPP55072 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VCPP55072 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
VCPP55072 MTCO1P12-201ENST00000414273 1543 ntBASIC4.26□□□□□ -1.73
VCPP55072 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VCPP55072 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VCPP55072 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
VCPP55072 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VCPP55072 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VCPP55072 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.26□□□□□ -1.73
VCPP55072 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.26□□□□□ -1.73
VCPP55072 MIR30B-201ENST00000384850 88 ntBASIC4.26□□□□□ -1.73
VCPP55072 HSPE1P12-201ENST00000412576 301 ntBASIC4.26□□□□□ -1.73
VCPP55072 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.26□□□□□ -1.73
VCPP55072 AC011742.1-201ENST00000431448 434 ntBASIC4.26□□□□□ -1.73
VCPP55072 ELOCP11-201ENST00000436690 332 ntBASIC4.26□□□□□ -1.73
VCPP55072 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.26□□□□□ -1.73
VCPP55072 AL513321.1-201ENST00000441175 761 ntBASIC4.26□□□□□ -1.73
VCPP55072 RPS4XP4-201ENST00000443195 763 ntBASIC4.26□□□□□ -1.73
VCPP55072 ELOCP16-201ENST00000444494 332 ntBASIC4.26□□□□□ -1.73
VCPP55072 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.26□□□□□ -1.73
VCPP55072 AL353718.1-201ENST00000451028 517 ntBASIC4.26□□□□□ -1.73
VCPP55072 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms